UFO01585.5prime Sequence
1185 bp (1007 high quality bases) assembled on 2008-10-06
> UFO01585.5prime
CAGTCGACATGTCGCACACCATCCTATTGGTACAGCCGGGTGCTCGTCCG
GAGACCCGCACTTACTGTGACTACGAGAGCGTCAACGAGTGCATGGAGGG
CGTGTGCAAGATCTACGAGGAGCACCTGAAGCGCCGCAATCCAAACACTC
CGACCATTACGTATGACATTAGCCAGCTATTCGATTTCATCGACACAATG
GTGGACATTAGCTGCATGGTTTACCAGAAGAGCACCAATACCTATGCGCC
CTACAATAAGGATTGGATCAAGGAGAAGATCTATGTGCTGCTCCGTCAGG
CGGCATTTAGTTCCAATACCGCAAGCTTTCTAGACCATTCGTTTGGCGCG
CGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCATAATCA
CAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAA
TAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGT
TCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGATAT
CAAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTA
AGCATTCTGCCGACATGGAAGCCATCACAAACGGCATGATGAACCTGAAT
CGCCAGCGGCATCAGCACCTTGTCGCCTTGCGTATAATATTTGCCCATGG
TGAAAACGGGGGCGAAGAAGTTGTCCATATTGGCCACGTTTAAATCAAAA
CTGGTGAAACTCACCCAGGGATTGGCTGAGACGAAAAACATATTCTCAAT
AAACCCTTTAGGGAAATAGGCCAGGTTTTCACCGTAACACGCCACATCTT
GCGAATATATGTGTAGAAACTGCCGGAAATCGTCGTGGTATTCACTCAGA
GCGATGAAAACGTTTCAGTTTGCTCATGGAAACGGTGTAACAGGTGAACA
CTATCCCATATCACCAGCTCCCCGTCTTTCATGCATACGAAATTCCGGAT
GAGCATTCATCAGGCGGGCAGATGTGAATAACGCCGGATAAACTTGTGCC
TTATTTTTTCTTTACGCTTAAAGCCGTATATCAGCCTGACGTCTGGTATA
GTTAATGGCACTGACTGATGCTCAGTTCTTACATGCATGGAATATATCAC
CGGGAAATATCCAAGGTAATTTTTCTCCTCACCAT
UFO01585.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:15:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| e(r)-RE | 1332 | CG1871-RE | 312..624 | 8..320 | 1565 | 100 | Plus |
| e(r)-RD | 1191 | CG1871-RD | 171..483 | 8..320 | 1565 | 100 | Plus |
| e(r)-RC | 1199 | CG1871-RC | 179..491 | 8..320 | 1565 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:15:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 8905067..8905379 | 320..8 | 1565 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:15:02 has no hits.
UFO01585.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:26:55 Download gff for
UFO01585.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| e(r)-RC | 173..496 | 1..325 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-17 12:40:45 Download gff for
UFO01585.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| e(r)-RA | 220..543 | 1..325 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:04:05 Download gff for
UFO01585.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| e(r)-RC | 173..496 | 1..325 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed on 2014-11-28 20:04:05 has no hits.
Sim4 to na_arms.dmel.RELEASE5 performed on 2013-08-04 22:26:55 has no hits.
