UFO01586.5prime Sequence
1197 bp (1013 high quality bases) assembled on 2008-10-06
> UFO01586.5prime
CAGTCGACATGCCCAAATTGATACTGTACGGCTTGGAGGCAAGTCCACCA
GTTCGTGCCGTCAAATTGACCTTGGCTGCCCTGGAGGTTCCCTACGAATT
CGTGGAGGTAAACACTCGGGCCAAGGAAAACTTCTCTGAGGAGTTTCTGA
AGAAGAATCCACAGCACACGGTGCCCACGTTGGAGGACGATGGACATTAT
ATCTGGGACTCACATGCCATTATTGCCTATCTGGTGTCCAAATACGGCAA
AACGGACAGTCTCTATCCGAAAGATCTCCTCCAGCGTGCTGTCGTGGATC
AGCGATTGCATTTCGAGTCCGGAGTGATCTTCGCTAATGCACTGAGAAGC
ATTACCAAGCCACTTTTCGCCGGTAAGCAAACGATGATTCCCAAGGAGCG
TTACGATGCGATTATTGAGGTCTATGACTTCCTGGAGAAATTCCTTGCTG
GAAATGACTACGTCGCCGGCAATCAGCTTACGATTGCCGACTTTAGTATC
ATATCAACTGTGTCCTCGTTGGAGGTCTTCGTAAAGGTGGACACGACCAA
ATATCCTCGGATAGCTGCATGGTTCAAGAGACTCCAAAAGCTGCCCTACT
ACGAGGAGGCCAACGGCAATGGTGCTCGTACATTTGAGTCCTTCATCAGA
GAGTATAATTTCACTTTCGCATCGAATGCAAGCTTTCTAGACCATTCGTT
TGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAATC
ATAATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTC
TCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAATCCAGA
TGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCT
CGATATCAAATTACGCCCCGCCCTGCACTCATCGCAGTACTGTTGTATTC
ATTAGCATTCTGCCGACATGGAAGCATCACAACGGCATGATGACCTGATC
GCAGCGGCATCAGCACCTTGTCGCTTGCGTATAATATTTGCCCATGGTGA
AACGGGCGAGAGTTGTCCTATTTGGCCACGTTTAAATCAACTGGGTGACT
CACCAGGATTGGCTGAACGAAACATTCAATACGTAGGAATAGCCAGTTTA
CCACGTAACGCGCCATTCTGCGCGATATATTATGTGTGAAAGAATCG
UFO01586.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:26:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| GstE7-RA | 765 | CG17531-RA | 32..700 | 9..677 | 3345 | 100 | Plus |
| GstE8-RB | 1122 | CG17533-RB | 26..427 | 8..409 | 755 | 79.8 | Plus |
| GstE8-RA | 758 | CG17533-RA | 26..427 | 8..409 | 755 | 79.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:26:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 18406955..18407623 | 9..677 | 3345 | 100 | Plus |
| 2R | 25286936 | 2R | 18407859..18408260 | 8..409 | 735 | 78.9 | Plus |
| 2R | 25286936 | 2R | 18404667..18405121 | 42..496 | 565 | 74.9 | Plus |
| 2R | 25286936 | 2R | 18406179..18406652 | 146..619 | 480 | 73.4 | Plus |
| 2R | 25286936 | 2R | 18397152..18397321 | 322..153 | 250 | 76.5 | Minus |
| 2R | 25286936 | 2R | 18403415..18403599 | 149..333 | 205 | 74.1 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:26:39 has no hits.
UFO01586.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:02:37 Download gff for
UFO01586.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| GstE7-RA | 22..703 | 1..681 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-17 12:40:47 Download gff for
UFO01586.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| GstE7-RA | 11..692 | 1..681 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:14:36 Download gff for
UFO01586.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| GstE7-RA | 22..703 | 1..681 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:14:36 Download gff for
UFO01586.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 18406945..18407626 | 1..681 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:02:37 Download gff for
UFO01586.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 14294450..14295131 | 1..681 | 99 | == | Plus |
