UFO01590.5prime Sequence
1201 bp (999 high quality bases) assembled on 2008-10-06
> UFO01590.5prime
CAGTCGACATGGTTTCGCAGCAGCAAATCGAGGCCATTGGAGGCGTTCTG
AACAACAAGGAACGCCCACTGAAAGAGCGCTTTCGAGCCCTCTTCACGCT
GAAGAACATCGGCGGAGGAGCGGCCATCGAGGCGATCAGCAAAGCCTTTG
ACGATGATTCGGCCCTTCTCAAACATGAGCTGGCCTACTGCTTGGGTCAG
ATGCAGGACGCACAGGCGTTAGACATCCTCACCAAGGTGCTAAAGGACAC
CACCCAGGAGCCGATGGTGCGCCACGAGGCTGCGGAGGCCATGGGCGCCA
TTGGTCATCCAGATGTGCTGCCAATTCTGGAGGAGTACAAACAAGATCCG
GTAGTGGAGGTGGCCGAAACATGTGCCATTGCTCTGGACCGCGTCCGCTG
GCTGCAGAGTGGCCAAAAGGTAGATGACAGCAACCCTTACGCCTCCGTTG
ATCCCTCACCGCCAACTGCGGGCGACAAGAGCGTCACCGAGCTGAAGGCC
ATCTATCTGGATGCCCAGCAGAGCCTGTTCGATCGATATAGGGCCATGTT
CAGCCTGCGCAATCTGCGCACCGAAGAGAGTGTCTTGGCCATTGCCGAGG
GACTTAAGGACTCTTCCGCCCTCTTCCGCCACGAGGTGGCCTTCGTACTG
GGCCAGCTGCAAGAACCCTGCAGCATTCCCTTCCTTCAAGAGAATCTGGA
GGATCGCCTGGAAAACGAAATGGTGCGTCACGAGTGTGCCGAGGCCCTTG
GCGCCATCGCCACAGAGGACTGCATTCAGATCTTGAACCGCTACGCCGAG
GACGACAAGCGCGTGGTCAAGGAGAGCTGCGTCATCGCCCTGGACATGTG
CGAGTACGAGAACAGTCCGGAGTTCCAATATGCCGACGGCCTAGCCAAAC
TAGACGCGACCAGGCAAGCTTTCTAGACCATTCGTTTGGCGCCGCGGGCC
AGGTAGTGGTCATAATCATATCATATCATATCATATCACACTAGCCTAGG
AGATCTGGTCATGACTAGTGCTTGGATCCCACAATAAAAACGCCCGGGCG
GCCACGAGCGTTCTGACATTCGGATGGAGTTCTGAGTCATTACTGGATCT
ATCACTGGATCAGGCGAGCTCGATCCAATAGGCTGCTGCACTATGCCGAA
CTGGTGATTCTTAAGCACTTTCGTCGGCAACTGGGAGCCATCCTCAAAAG
C
UFO01590.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:48:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| nero-RA | 1114 | CG2245-RA | 84..987 | 9..912 | 4520 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:48:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 31746572..31747475 | 912..9 | 4520 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:48:47 has no hits.
UFO01590.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:40:55 Download gff for
UFO01590.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| nero-RA | 77..987 | 1..912 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-17 12:40:49 Download gff for
UFO01590.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| l(3)s1921-RA | 48..958 | 1..912 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:30:05 Download gff for
UFO01590.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| nero-RA | 77..987 | 1..912 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:30:05 Download gff for
UFO01590.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 31746572..31747482 | 1..912 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:40:55 Download gff for
UFO01590.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 27572294..27573204 | 1..912 | 99 | | Minus |
