UFO01619.5prime Sequence
1075 bp (978 high quality bases) assembled on 2008-10-17
> UFO01619.5prime
CAGTCGACATGGCTGGAGTACTCTTTGAGGACATCTTCAACGTAAAGGAC
ATGGATCCGGAGGGCAAAAAGTTCGACCGTGTATCCCGCCTGCACTGCGA
GTCCGAGTCGTTTAAGATGGACCTCATCCTGGACATCAACTCGTGGCTAT
ACCCCATGGAGCTGGGCGACAAGTTCCGCCTGGTTTTGGCCACCACCCTG
CGCGAGGATGGTTGCCCGGACAGCGGGGAGTACAATCCAATGGAGCACGA
GGGAACGCGGGCGGACAGCTTTGAGTACGTGATGTACGGCAAGATCTACA
GGATCGAGGGCGACGAAGCACACAATGAGGCCTCCCGGCTCTCCGCCTAC
GTGTCATTCGGCGGCTTGCTGATGCGACTTCAGGGTGACGCCAACAATCT
TCATGGCTTCGAGGTGGACCAGCACATGTACCTGCTGATGAAGCGGCTGG
CCTTCGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGT
GGTCATAATCATAATCATAATCATAATCATAATCACAACTAGCCTAGGAG
ATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGC
GGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACT
GGATCTATCAACAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCCCGC
CCTGCCACTCATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCGACA
TGGAAGCCATCACAAACGGCATGATGAACCTGAATCGCCAGCGGCATCAG
CACCTTGTCGCCTTGCGTATAATATTTGCCCATGGTGAAAACGGGGGCGA
AGAAGTTGTCCATATTGGTCACGTTTAAATCAAAACTGGTGAAACTCACC
CAGCGATTGGCTGAGACGAAAAACATATTCTCAATAAACCCTTTAGTGTA
AGTAGGCCAGGCTTTCACCGTACCACGCCACATCTTGCGAATATATGTGT
AGGACTGCCGGAAATCGATCTGGTATGCCATCAGAGCGGATGAAAACGAA
TCAGTTGCTCATGCAAAGGAGTAAC
UFO01619.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:17:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Rpb8-RA | 692 | CG11246-RA | 191..637 | 9..455 | 2235 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:17:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 21729193..21729639 | 9..455 | 2235 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:17:20 has no hits.
UFO01619.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:27:41 Download gff for
UFO01619.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Rpb8-RA | 182..648 | 1..467 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-17 12:47:37 Download gff for
UFO01619.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Rpb8-RA | 170..636 | 1..467 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:05:28 Download gff for
UFO01619.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Rpb8-RA | 182..648 | 1..467 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:05:28 Download gff for
UFO01619.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 21729185..21729635 | 1..451 | 99 | <- | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:27:41 Download gff for
UFO01619.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 21722285..21722735 | 1..451 | 99 | <- | Plus |
