UFO01625.5prime Sequence
1061 bp (986 high quality bases) assembled on 2008-10-17
> UFO01625.5prime
CAGTCGACATGGACTTCGGAGACGATTTCGCTGCCAAGGAGGACGTGGAT
CCGGCGGCCGAGTTCCTGGCGCGCGAACAGTCAGCTCTCGGGGACTTGGA
GGCGGAGATTACGGGTGGATCTGCATCAGCTCCTCCGGCTGCATCCACAG
ACGAGGGCTTGGGTGAGCTTCTGGGAGGCACCGCCTCCGAAGGCGATTTG
CTCTCTGCTGGCGGCACGGGTGGCCTCGAATCCTCCACTGGCAGTTTTGA
GGTCATTGGTGGCGAGTCCAATGAACCCGTGGGCATATCCGGTCCGCCGC
CGTCGCGGGAAGAGCCCGAAAAGATACGCAAATGGCGCGAAGAGCAAAAG
CAACGACTGGAGGAGAAGGACATCGAGGAGGAGCGAAAAAAGGAGGAACT
CCGACAGCAGTCCAAGAAGGAGCTGGACGACTGGTTGCGCCAGATTGGCG
AGTCCATATCGAAGACCAAACTGGCGTCGCGGAATGCCGAGAAACAAGCC
GCCACCCTGGAGAATGGCACCATCGAGCCGGGCACCGAATGGGAGCGCAT
AGCCAAGCTCTGCGACTTCAATCCCAAGGTGAACAAGGCGGGAAAGGACG
TCTCCCGCATGCGATCCATCTACCTGCACCTCAAGCAGAATCCCATCCAG
GTGCAGAAGAGCACCGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGC
CCAGGTAAGTGGTCATAATCATAATCATAATCATAATCATAATCACAACT
AGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAA
AACGCCCGGCGGCAACCGAGCGTTCTGAACAATCCAGATGGAGTTCTGAG
TCATTACTGGATCTATCAACAGAGTCCAAGCGAGCTCGATATCAAATTAC
GCCCCGCCCTGCACTCATCGCAGTACTGTGTAATTCATTAAGCATCTGCG
ACATGCAGCATCACAAACGCATGATGAACCTGATCGCAGCGCATCAGCAC
TGTCCCCTGCGTATATTTGCATGGTGAACGGGGCGGAGGTGTCTATGCAC
GTAATCAACTG
UFO01625.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:25:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Clc-RD | 1073 | CG6948-RD | 135..792 | 8..665 | 3275 | 99.8 | Plus |
| Clc-RC | 1230 | CG6948-RC | 292..949 | 8..665 | 3275 | 99.8 | Plus |
| Clc-RB | 1005 | CG6948-RB | 67..724 | 8..665 | 3275 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:25:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 20242797..20243454 | 8..665 | 3275 | 99.8 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:25:24 has no hits.
UFO01625.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:02:13 Download gff for
UFO01625.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Clc-RB | 61..724 | 1..665 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-17 12:47:41 Download gff for
UFO01625.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Clc-RA | 185..848 | 1..665 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:14:04 Download gff for
UFO01625.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Clc-RB | 61..724 | 1..665 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:14:04 Download gff for
UFO01625.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 20242791..20243454 | 1..665 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:02:13 Download gff for
UFO01625.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 20235891..20236554 | 1..665 | 99 | == | Plus |
