UFO01626.5prime Sequence
1106 bp (1025 high quality bases) assembled on 2008-10-17
> UFO01626.5prime
CAGTCGACATGCTGAAGCGCGATCTGCAGAAAATCACACTCAAGCTGTCC
GATCTCAAGGACTATGAGGTTGCCCGCCAAAAGAACAAGTTAAAGGGCGC
CCCGCGACCTAGGCTTTCTCAGGACGCCCTCCCCGGAGACGACGCCTCCA
CTTCGGGAACAACGGCAAGTTGCAGTTCCAACACGGAAACGGCCACGGAA
ACCGCATCGGGATCCGGATCAGGGTCTGGATCGGGCTCGGGTTCTGGGTC
CGGGTCGTACATTACGGGAATGGGCTACCGTTCGGAGACACCCTCCTCCG
CATCGTACACCACGTCGACGACCCCGACTCCGGCCACTCAGGAGGAGATA
CTGAGACCCTCGTCCGCCGTCACGGCCACCACAACCACTGGCACCACTAA
TTCCGGCTCCACGGATGACGTGAGCGTGGCGGCCGTAGTGGATGACACGG
ATACCATTGACGAAATCAGCGATGACAACTGGGTGGACCTGAATGCGGAC
ACCAACGATACCGTTGATACCCAGCCGGAGGAGCAGGACCAACTGCAAGA
GGTGGAGGAGGAGGATGGGGCTAGGGGAGGAGTGGCAAGCTTTCTAGACC
ATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAAT
CATAATCATAATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCT
TGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACA
AATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCA
AGCGAGCTCGATATCAAATTACGCCCCGCCCTGCCACTCATCGCAGTACT
GTTGTAATTCATTAAGCATTCTGCCGACATGGAAGCCATCACAACGGCAT
GATGAACCTGAATCGCAGCGCATCAGCACCTTGTCGCCTTGCGTATAATA
TTTGCCATGTGAACGGGGGCGAAGAGTGTCCATATTGGCCACGTTTAATC
AACTGTGAACTCACCAGGATGCTGAACGAAAACATATTCTCAATAACCCT
TTAGGAATAGCAGGTTCCGTAACCGCCCATTTGCAATATGTGTAACTGCG
ATGTCT
UFO01626.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:32:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3457-RB | 1100 | CG3457-RB | 73..653 | 4..584 | 2890 | 99.8 | Plus |
| CG3457-RA | 891 | CG3457-RA | 73..653 | 4..584 | 2890 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:32:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 2187892..2188472 | 4..584 | 2890 | 99.8 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:32:12 has no hits.
UFO01626.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:33:15 Download gff for
UFO01626.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3457-RA | 71..656 | 1..588 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-17 12:47:41 Download gff for
UFO01626.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3457-RA | 69..654 | 1..588 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:06:49 Download gff for
UFO01626.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3457-RA | 71..656 | 1..588 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:06:49 Download gff for
UFO01626.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 2187890..2188475 | 1..588 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:33:15 Download gff for
UFO01626.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 2081923..2082508 | 1..588 | 99 | == | Plus |
