Clone UFO01630 Report

Search the DGRC for UFO01630

Clone and Library Details

Library:UFO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2008-06-20
Comments:BD Creator expression clones with C-terminus FLAG HA tag for transgenic expression using PhiC31 integrase system
Original Plate Number:16
Well:30
Vector:pUAST-CFLAGHA-BD-PHI
Associated Gene/TranscriptCyp4ac3-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

UFO01630.5prime Sequence

1107 bp (1002 high quality bases) assembled on 2008-10-17

> UFO01630.5prime
CAGTCGACATGTGGATCGCTCTGCTTGGGTCTTCACTTTTGATTGGGGCT
CTTTGGCTCCTGCTGAGACAACTTAATAAAACGTATTTTATTCTTTCATT
ATGCAAACGAGTGCGAACAGCGGATGGAAGTCCATTGGAAAGCAAAGTGT
TCGTTGTTCCCGGAAAAACGCGATTTGGCAACAATTTGGATCTACTCAAT
TTAACGCCAGCTAATATTTTTAGCTACATACGAGAGTCCACTGCCAAAGC
CAATGGACAAAATTATATATGGAATTTCCTATTTGCACCAGAATATAATA
TTGTTCGTGCCGAAGACGCTGAAGAAATATTTCAGAGCACCAAAATCACT
ACAAAGAATATGTCTTATGAATTGATAAGACCATTTCTTGGAGACGGGCT
GCTGATAAGCATAGACCAGAAATGGCACACAAGAAGAAAAACTTTGACCC
CAGCTTTTCATTTTAATATTCTGCAGTCTTTTCTCTCTATTTTTAAAGAA
GAGAGCAAAAAGTTTATCAAAATACTGGACAAGAACGTTGGCTTCGAGCT
TGAACTTAACCAGATAATTCCACAATTTACTCTAAACAATATTTGCGAAA
CTGCCCTAGGCGTAAAACTAGATGACATGTCGGAAGGAAACGAGTACAGA
AAGGCCATCCATGACTTTGAAATAGTTTTCAATCAGCGCATGTGCAATCC
GCTCATGTTCTTCAACTGGTACTTCTTCCTTTTCGGAGATTATAAAAAGT
ATTCCAGGATACTGCGTACAATTCACGGCTTCTCGAGCGGTATCATTCAA
CGCAAAAGGCAGCAATTCAAGCAGAAACAACTTGGCCAAGTTGATGAATT
TGGCAAGAAGCAGCGTTACGCCATGCTGGACACTCTTTTTGGCAGCTGAG
CGGAGGGCAAGATCGATCATCAGGAATCTGCGATGAAGTCATACCTTTAT
GTTCGGGGATACGATACCACATCAACCAGTCTAATCTTTACCCTGTTATT
GTTGGCTCTGCATGCGGATGTCCAAAAGCGGGTGCTACGAAAAAGCTTAC
AAAAACTTCCCGAGGAAAATTGGATGAAGTTCAGATATGTTCAAATTTAA
GAAACTG

UFO01630.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:40:56
Subject Length Description Subject Range Query Range Score Percent Strand
Cyp4ac3-RA 1606 CG14031-RA 49..1143 9..1107 5065 98 Plus
Cyp4ac1-RA 1666 CG14032-RA 34..1056 9..1028 1515 77.3 Plus
Cyp4ac2-RB 1709 CG17970-RB 866..1066 831..1028 435 82.7 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:40:54
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 5269360..5269797 597..1031 1915 98.4 Plus
2L 23513712 2L 5268797..5269003 208..414 1035 100 Plus
2L 23513712 2L 5268546..5268747 9..210 1010 100 Plus
2L 23513712 2L 5264855..5265289 597..1028 735 79.5 Plus
2L 23513712 2L 5269192..5269300 489..597 530 99.1 Plus
2L 23513712 2L 5269051..5269135 412..496 425 100 Plus
2L 23513712 2L 5267612..5267812 831..1028 330 81.1 Plus
2L 23513712 2L 5264034..5264216 9..191 300 77.6 Plus
2L 23513712 2L 5264319..5264496 234..411 290 77.5 Plus
Blast to na_te.dros performed on 2014-11-28 20:40:55 has no hits.

UFO01630.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:35:15 Download gff for UFO01630.5prime
Subject Subject Range Query Range Percent Splice Strand
Cyp4ac3-RA 49..1111 9..1072 98   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-17 12:47:46 Download gff for UFO01630.5prime
Subject Subject Range Query Range Percent Splice Strand
Cyp4ac3-RA 30..1092 9..1072 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:25:25 Download gff for UFO01630.5prime
Subject Subject Range Query Range Percent Splice Strand
Cyp4ac3-RA 49..1111 9..1072 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:25:25 Download gff for UFO01630.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 5268546..5268747 9..210 100 -> Plus
2L 5268800..5269003 211..414 100 -> Plus
2L 5269054..5269135 415..496 100 -> Plus
2L 5269200..5269300 497..597 100 -> Plus
2L 5269361..5269818 598..1053 97 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:35:15 Download gff for UFO01630.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 5268546..5268747 9..210 100 -> Plus
arm_2L 5268800..5269003 211..414 100 -> Plus
arm_2L 5269054..5269135 415..496 100 -> Plus
arm_2L 5269200..5269300 497..597 100 -> Plus
arm_2L 5269361..5269818 598..1053 97 -> Plus