UFO01630.5prime Sequence
1107 bp (1002 high quality bases) assembled on 2008-10-17
> UFO01630.5prime
CAGTCGACATGTGGATCGCTCTGCTTGGGTCTTCACTTTTGATTGGGGCT
CTTTGGCTCCTGCTGAGACAACTTAATAAAACGTATTTTATTCTTTCATT
ATGCAAACGAGTGCGAACAGCGGATGGAAGTCCATTGGAAAGCAAAGTGT
TCGTTGTTCCCGGAAAAACGCGATTTGGCAACAATTTGGATCTACTCAAT
TTAACGCCAGCTAATATTTTTAGCTACATACGAGAGTCCACTGCCAAAGC
CAATGGACAAAATTATATATGGAATTTCCTATTTGCACCAGAATATAATA
TTGTTCGTGCCGAAGACGCTGAAGAAATATTTCAGAGCACCAAAATCACT
ACAAAGAATATGTCTTATGAATTGATAAGACCATTTCTTGGAGACGGGCT
GCTGATAAGCATAGACCAGAAATGGCACACAAGAAGAAAAACTTTGACCC
CAGCTTTTCATTTTAATATTCTGCAGTCTTTTCTCTCTATTTTTAAAGAA
GAGAGCAAAAAGTTTATCAAAATACTGGACAAGAACGTTGGCTTCGAGCT
TGAACTTAACCAGATAATTCCACAATTTACTCTAAACAATATTTGCGAAA
CTGCCCTAGGCGTAAAACTAGATGACATGTCGGAAGGAAACGAGTACAGA
AAGGCCATCCATGACTTTGAAATAGTTTTCAATCAGCGCATGTGCAATCC
GCTCATGTTCTTCAACTGGTACTTCTTCCTTTTCGGAGATTATAAAAAGT
ATTCCAGGATACTGCGTACAATTCACGGCTTCTCGAGCGGTATCATTCAA
CGCAAAAGGCAGCAATTCAAGCAGAAACAACTTGGCCAAGTTGATGAATT
TGGCAAGAAGCAGCGTTACGCCATGCTGGACACTCTTTTTGGCAGCTGAG
CGGAGGGCAAGATCGATCATCAGGAATCTGCGATGAAGTCATACCTTTAT
GTTCGGGGATACGATACCACATCAACCAGTCTAATCTTTACCCTGTTATT
GTTGGCTCTGCATGCGGATGTCCAAAAGCGGGTGCTACGAAAAAGCTTAC
AAAAACTTCCCGAGGAAAATTGGATGAAGTTCAGATATGTTCAAATTTAA
GAAACTG
UFO01630.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:40:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Cyp4ac3-RA | 1606 | CG14031-RA | 49..1143 | 9..1107 | 5065 | 98 | Plus |
Cyp4ac1-RA | 1666 | CG14032-RA | 34..1056 | 9..1028 | 1515 | 77.3 | Plus |
Cyp4ac2-RB | 1709 | CG17970-RB | 866..1066 | 831..1028 | 435 | 82.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:40:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 5269360..5269797 | 597..1031 | 1915 | 98.4 | Plus |
2L | 23513712 | 2L | 5268797..5269003 | 208..414 | 1035 | 100 | Plus |
2L | 23513712 | 2L | 5268546..5268747 | 9..210 | 1010 | 100 | Plus |
2L | 23513712 | 2L | 5264855..5265289 | 597..1028 | 735 | 79.5 | Plus |
2L | 23513712 | 2L | 5269192..5269300 | 489..597 | 530 | 99.1 | Plus |
2L | 23513712 | 2L | 5269051..5269135 | 412..496 | 425 | 100 | Plus |
2L | 23513712 | 2L | 5267612..5267812 | 831..1028 | 330 | 81.1 | Plus |
2L | 23513712 | 2L | 5264034..5264216 | 9..191 | 300 | 77.6 | Plus |
2L | 23513712 | 2L | 5264319..5264496 | 234..411 | 290 | 77.5 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:40:55 has no hits.
UFO01630.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:35:15 Download gff for
UFO01630.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cyp4ac3-RA | 49..1111 | 9..1072 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-17 12:47:46 Download gff for
UFO01630.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cyp4ac3-RA | 30..1092 | 9..1072 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:25:25 Download gff for
UFO01630.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cyp4ac3-RA | 49..1111 | 9..1072 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:25:25 Download gff for
UFO01630.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 5268546..5268747 | 9..210 | 100 | -> | Plus |
2L | 5268800..5269003 | 211..414 | 100 | -> | Plus |
2L | 5269054..5269135 | 415..496 | 100 | -> | Plus |
2L | 5269200..5269300 | 497..597 | 100 | -> | Plus |
2L | 5269361..5269818 | 598..1053 | 97 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:35:15 Download gff for
UFO01630.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 5268546..5268747 | 9..210 | 100 | -> | Plus |
arm_2L | 5268800..5269003 | 211..414 | 100 | -> | Plus |
arm_2L | 5269054..5269135 | 415..496 | 100 | -> | Plus |
arm_2L | 5269200..5269300 | 497..597 | 100 | -> | Plus |
arm_2L | 5269361..5269818 | 598..1053 | 97 | -> | Plus |