UFO01637.5prime Sequence
1096 bp (1017 high quality bases) assembled on 2008-10-17
> UFO01637.5prime
CAGTCGACATGCTACCACGTTTGCTACTGCCCATCATTGGAGGAGTATTA
ATACTTTTGATAGTTGATCAATGCAATGGCAAGCGCAAGTGGGACTACGA
ACCGCTGTCCATTGAAACCTATACCACGGATGAGACTAAGCTGAAGATTG
CGGCCAAAGTGGAGCGAGTCGGTAGGGGAGAATATGCCCTTTCTGGCAAC
ATTGAATTTAAGTACACACCAGAAGATAATACCATGGTTGAAGCAATGGC
CTATCGAAGCACCTCCGGGGACGAAAATGACTACAAGATTATGCCGTTTA
GCATCCCGAAACAGCCATATGTTGAGTTCATGAACAGCCACTATAAGAAC
GTAGTGCTACCAAATCTGGGCGATTGTTCCAATCTCATCAAGTTTGATGG
CAAATTCGAGCCACCGTGGCCCCAGGATACGTACGTGTTGGAAAAGTGTG
TGGCAAACAGTGATGGTTTTCCGGATATGGTTCCCGAGGGCTACTACAAG
GTCAATTTCACCTTGACGAATCCCGTGGATTGGGGATTCATTCTGATTGT
GAAGATAACCACAAAACTTGTCGCAAGCTTTCTAGACCATTCGTTTGGCG
CGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCATAAT
CACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACC
AATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGA
GTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGAT
ATCAAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCAT
TAAGCATTCTGCCGACATGGAAGCCATCACAAACGGCATGATGACCTGAT
CGCCAGCGGCATCAGCACCTTGTCGCCTTGCGTATATATTTGCCCATGTG
AAACGGGGCGAGAGTGTCCATATTGGCCACGTTTAATCAACTGTGAACTC
ACCCAGGGATGCTGAAACGAAAACTATTTCTCAAAAACCCTTTAGAATAG
GCAAGTTCACCGTAACCCCCCACATCTTGCAATATTTGGTGAACTG
UFO01637.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:34:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14502-RD | 711 | CG14502-RD | 30..593 | 9..572 | 2820 | 100 | Plus |
CG14502-RC | 1269 | CG14502-RC | 588..1151 | 9..572 | 2820 | 100 | Plus |
CG14502-RB | 2224 | CG14502-RB | 1543..2106 | 9..572 | 2820 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:34:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 18294258..18294594 | 236..572 | 1685 | 100 | Plus |
2R | 25286936 | 2R | 18294010..18294166 | 82..238 | 785 | 100 | Plus |
2R | 25286936 | 2R | 18293875..18293949 | 9..83 | 375 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:34:14 has no hits.
UFO01637.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:47:12 Download gff for
UFO01637.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14502-RB | 1543..2106 | 9..572 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-17 12:48:03 Download gff for
UFO01637.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14502-RB | 1543..2106 | 9..572 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:05:53 Download gff for
UFO01637.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14502-RB | 1543..2106 | 9..572 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:05:53 Download gff for
UFO01637.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 18293875..18293949 | 9..83 | 100 | -> | Plus |
2R | 18294012..18294164 | 84..236 | 100 | -> | Plus |
2R | 18294259..18294594 | 237..572 | 100 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:47:12 Download gff for
UFO01637.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 14181380..14181454 | 9..83 | 100 | -> | Plus |
arm_2R | 14181517..14181669 | 84..236 | 100 | -> | Plus |
arm_2R | 14181764..14182099 | 237..572 | 100 | == | Plus |