UFO01647.5prime Sequence
1024 bp (926 high quality bases) assembled on 2008-10-17
> UFO01647.5prime
CAGTCGACATGGATATATCCGCGCCACCAAACAAACGTGCTCGAAAATCA
CCCAATCTGGATGAAGACATAACTGGGATCCGGGCCATCCTCTCCGATGA
GTTCGACGAGGATATTGCGCTCATCAAGGCGCACAGTTGCGAGTTGGAGA
CGAAACAGCAGCTCCAGGCGGTCATCCAGGAGCTCTCACAGAAATTGCCC
CACTTTCAACACCTAAAGCGCGTCCAGGATCGCAGCGTGCTCATATGTCC
CAGCTCAGAGATCGGAGTGTCTCAAAGCCTGGAACAACACCTTGAACAGT
TTGCCTTTTCGGAGCACGTGCTCCGTGCTTTGTGCCAGGGAGTCCGGGTG
GTGGAGGTGCCGGAACGGATGCCCCGACTGCGGGTGCAGTACGAGAAGAC
CCTTAAGCACTGGCCCTGCAAGTTTCACCCTAATCACTACTCGGAGTCAC
TGAGGAATGGCAGCAACTTTAGCTCCGCACAACGCACATTTCACAAAAGG
ATCGGGCAATTGCTTGTGAGGCTCTCGCGGGATGTCAATGCCAATCGTCC
GGTGGGCATCTGCGTGGATCCGCGACAACCCAGCATTGTGTCCATTGCTG
GAACTGGTGAAGTTTGTAGGCCGCACGAGCACTGCTGCATGATGCTCGTC
GATTTTGTGGCTCGCAGTCAAGAAAGGAGGCGCCACAAAAACGGAGGTTA
CATTCACCGAAGATTTCAAGAAGGATACCACTCTGCGGGGTATTCCTAAA
GCCTACTACGATTACCTGATGAACAATGAAGACTACAAAGACCTGACATT
CGGAGCGGAAAAGTCGAGAGATGCAAAGAAGTGGACGCAGTTCACGAGCA
GATACCTGCCAAATCGACCCTATCTGTGCACCGGCTACGATATCTATCTG
CTGCAGACCCTGCCTTATGTGCTCCATGTCCTGTACATAGCAGCGAAAGA
GTATTTTTCGTAAGACCTCTGGAAACGGAGCTCTAGCCACGAGATCACTG
CAATCGTGCGGACCCACCATCCCT
UFO01647.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:14:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10927-RA | 1166 | CG10927-RA | 38..1037 | 9..995 | 4590 | 98.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:14:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 18613127..18614126 | 9..995 | 4330 | 97.6 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:14:49 has no hits.
UFO01647.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:59:02 Download gff for
UFO01647.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10927-RA | 38..1057 | 9..1011 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-17 12:48:01 Download gff for
UFO01647.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10927-RA | 46..1065 | 9..1011 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:09:14 Download gff for
UFO01647.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10927-RA | 38..1057 | 9..1011 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:09:14 Download gff for
UFO01647.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 18613127..18614146 | 9..1011 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:59:02 Download gff for
UFO01647.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 14500632..14501651 | 9..1011 | 97 | | Plus |
