UFO01651.5prime Sequence
758 bp (652 high quality bases) assembled on 2008-10-17
> UFO01651.5prime
CAGTCGACATGATGTCGCATCAACTGCAGCAGACACGCCGCCGTTTGGGC
TCCGTTAGCGATTCGGCGCCACCATCGGAGTCCAGTGAGGGCACAGGCTC
CTCCCTGGAGCCACGGGACGAGCTGATTCTCCATCCGGACTGGTCGGCCC
ACTCGCATTCGTCGGCACAGAGGAGCAGCGCCCATGGAACCACATCGCTG
TACAATGCCTCGGATATCGATGCGGATACCATCAGCACGGACACCACGAG
CAACACAAATCTATCGGACTACGAACGTGGTCAGGTGGAGAGTTTCTTCG
GCGGATTGGGCACAGAGATATTCGTGAGCGGCGCTTTGGCCAATCTCTAC
GAGGGAACCGGAAACGATGGCGACTGGCGTTTGGTGTTCACCGGCATACC
GGTGATACTGCACGACAAGGGAAACTCCAAGGCCAGAGCCATACCCAGAG
TGACGCTGGTTCTGGCGGAGAGGGGCTCCTGCTTCGCCCTGTGGTCGGAT
CGGATTGATAACCTGTCGAACTATCGGATCGCGGGTCCCTCGTTCCACAC
GATGTGCCGGTCCAGCAATCATCAGCAGATGATTGGCTTCAGCTTCGATT
CCACGGATGCGCACGCGAATTGTGGCAGCACGTGAGCGTTTGTCAGCAAT
CCAGAGGATGAGGCTCTACGTGGCGGACCCGCAAGCCGAAGAAACAGAAG
CGCGTCAGCGCTCCCTGCCACCGAAGTCCCGATTTCGCATCATGCATCCA
ACACGGGA
UFO01651.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:34:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| MESR3-RC | 2067 | CG15162-RC | 497..1241 | 9..741 | 3430 | 98.3 | Plus |
| MESR3-RB | 2099 | CG15162-RB | 529..1273 | 9..741 | 3430 | 98.3 | Plus |
| MESR3-RA | 2099 | CG15162-RA | 529..1273 | 9..741 | 3430 | 98.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:34:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 18660208..18660911 | 11..707 | 3210 | 98.7 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:34:17 has no hits.
UFO01651.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:47:14 Download gff for
UFO01651.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| MESR3-RA | 529..1281 | 9..751 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-17 12:48:24 Download gff for
UFO01651.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| MESR3-RA | 528..1280 | 9..751 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:05:54 Download gff for
UFO01651.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| MESR3-RA | 529..1281 | 9..751 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:05:54 Download gff for
UFO01651.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 18660208..18660958 | 11..751 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:47:14 Download gff for
UFO01651.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 18660208..18660958 | 11..751 | 97 | | Plus |
