Clone UFO01655 Report

Search the DGRC for UFO01655

Clone and Library Details

Library:UFO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2008-06-20
Comments:BD Creator expression clones with C-terminus FLAG HA tag for transgenic expression using PhiC31 integrase system
Original Plate Number:16
Well:55
Vector:pUAST-CFLAGHA-BD-PHI
Associated Gene/Transcript
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

UFO01655.5prime Sequence

756 bp (310 high quality bases) assembled on 2008-10-17

> UFO01655.5prime
CAATCCACATGCCCGATAGTTGTACGGCGGACCTACGAAGTCGCCGCCGC
GAAAATCCAATCGACCGCAACGGCAATATTGGCGGCACAGGCAAGGAGCA
GGCGACAAGCACCAGGCCTAATCTGACAACCGAATATACCCAACGGACTA
ACGAAATGACTGCGAGCAAGGAAGGTCAAGAATCCAGGCGAACCCTCACC
GACAGTTCCGCAGAGGACGTCAGGAATACAGGATCAAGGACCAGGACCAA
CGACTACCAAATGTGGCGCAATGAACTTGCTATGAACACGGACAGCAGCT
CCGTTCAGCCAGAAAAGCGAGAGGAACGAAGCCACAGAACAGGAAACTCT
AATGCGAAACTCATCGATGCCGTAGATGTTGTTCTTCGCGTTCTCCTCGT
CATTACCTTCTTCAAGTTGGAGACGATGACAGCATTCAAACGGGAAATCC
ACGAGGAAGAGCTGTGGCTATACAAGAACGCAAGGCGACCGGACATTGTC
AGGGGCGGGGAGCTGCTCTTCTGGGTGATAGTGGCTCCCTTTCTGGTCAC
TATCGCCTTCTACTGGTACACAAGAGACAGGCGGCTCTGCATCGCTGTGA
TACCTCTGTTTATCGCACTGCTGGTTGCAGTTAGTCGCACTGCGACTACC
ACCACCACTGGCAGATGTGATCATCGCGGGCTGATTGGCCTGTTTGCAGC
TATATAGCTACACACATACTATCCCTTCTTCTTTCTGCCTGATGCAGCTA
CCCTGT

UFO01655.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:26:19
Subject Length Description Subject Range Query Range Score Percent Strand
CG12746-RE 1509 CG12746-RE 196..771 9..584 2760 98.6 Plus
CG12746-RD 1381 CG12746-RD 161..643 102..584 2295 98.3 Plus
CG12746-RB 1339 CG12746-RB 119..601 102..584 2295 98.3 Plus
CG12746-RE 1509 CG12746-RE 1103..1274 580..745 620 93.6 Plus
CG12746-RD 1381 CG12746-RD 975..1146 580..745 620 93.6 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:26:17
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 5566086..5566398 100..412 1460 97.8 Plus
3R 32079331 3R 5566467..5566638 413..584 845 99.4 Plus
3R 32079331 3R 5565361..5565454 9..102 470 100 Plus
3R 32079331 3R 5567029..5567188 580..733 455 94.4 Plus
Blast to na_te.dros performed on 2014-11-28 22:26:18 has no hits.

UFO01655.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:02:30 Download gff for UFO01655.5prime
Subject Subject Range Query Range Percent Splice Strand
CG12746-RE 193..773 3..585 97 <- Plus
CG12746-RE 1109..1283 586..752 92   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-17 12:48:29 Download gff for UFO01655.5prime
Subject Subject Range Query Range Percent Splice Strand
CG12746-RE 193..773 3..585 97 <- Plus
CG12746-RE 1109..1283 586..752 92   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:14:25 Download gff for UFO01655.5prime
Subject Subject Range Query Range Percent Splice Strand
CG12746-RE 193..773 3..585 97 <- Plus
CG12746-RE 1109..1283 586..752 92   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:14:25 Download gff for UFO01655.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 5565358..5565453 3..101 96 -> Plus
3R 5566088..5566398 102..412 97 -> Plus
3R 5566467..5566634 413..580 99 -> Plus
3R 5567030..5567209 581..752 92   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:02:30 Download gff for UFO01655.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 1392189..1392356 413..580 99 -> Plus
arm_3R 1392752..1392931 581..752 92   Plus
arm_3R 1391080..1391175 3..101 96 -> Plus
arm_3R 1391810..1392120 102..412 97 -> Plus