UFO01661.5prime Sequence
1085 bp (977 high quality bases) assembled on 2008-10-17
> UFO01661.5prime
CAGTCGACATGTCCTCGCCCAGTGCCGGAAAGCGACGCATGGACAACGAT
GTGATCAAGCTGATCGAATCAAAGCACGAGGTGACCATCCTGGGAGGCCT
CAACGAGTTCCACGTCAAGTTCTTCGGTCCAACGGAGACGCCCTACGAGG
GCGGCGTGTGGAAGGTGCGCGTCTACCTGCCCGACAACTATCCCTTCAAG
TCACCGAGCATTGGTTTTGTGAACAAGATCTACCATCCGAACATTGACGA
ATCCTCGGGTACGGTGTGCCTGGATGTTATCAATCAGGCCTGGACGGCGT
TGTACGATCTATCGAACATATTTGAATCGTTCTTGCCGCAGCTGCTCACA
TATCCCAATCCGGTCGATCCGCTCAATCGGGATGCGGCCGCATTGTACCT
GCACGAGCCGGAGGAGTATCATCGCAAGGTGGCCGACTATGTGCAGCGCT
ATGCCACCGAGGACGCGTTGCGGGCGGCGCAGCAGGAGCGGGAGAGCAGC
GACAGCGAGTCGAGCATGTCCGACTACAGTGAGGATGAGGCCAGGGACAT
GGAATTAGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAA
GTGGTCATAATCATAATCATAATCATAATCATAATCACAACTAGCCTAGG
AGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCG
GCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTA
CTGGATCTATCAACAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCCC
GCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCGA
CATGGAAGCCATCACAAACGGCATGATGAACCTGAATCGCCAGCGGCATC
AGCACTTGTCGCTTGCGTATATATTTGCCCATGGTGAAACGGGGCGAGAG
TGTCATATTGCACGTTTAAATCAAACTGTGAACTCACCAGGATGCTGAAA
CGAAAAACTATTCTCATACCCTTTAGGAATAGCAGTTTAACGTAACGCCA
ATCTTGCAATATTTGGTGACTGCGAATGTCTGTAA
UFO01661.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:34:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| UbcE2H-RB | 2292 | CG2257-RB | 441..989 | 9..557 | 2745 | 100 | Plus |
| UbcE2H-RC | 2328 | CG2257-RC | 477..1025 | 9..557 | 2745 | 100 | Plus |
| UbcE2H-RA | 2894 | CG2257-RA | 578..1126 | 9..557 | 2745 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:34:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 8089312..8089860 | 557..9 | 2745 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:34:24 has no hits.
UFO01661.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:47:18 Download gff for
UFO01661.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ubc-E2H-RA | 571..1129 | 1..561 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-17 12:48:43 Download gff for
UFO01661.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ubc-E2H-RA | 571..1129 | 1..561 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:05:57 Download gff for
UFO01661.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| UbcE2H-RA | 571..1129 | 1..561 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:05:57 Download gff for
UFO01661.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 8089309..8089867 | 1..561 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:47:18 Download gff for
UFO01661.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 7983342..7983900 | 1..561 | 98 | | Minus |
