UFO01666.5prime Sequence
874 bp (754 high quality bases) assembled on 2008-10-17
> UFO01666.5prime
CAGTCGACATGAAATTTGCAATCGAGAGTATTAGCAAGAATTCTGGTCGA
CTAGGTCAACTGCGAATCAGGGATGGAGGACCCGAGTTCAAGACTCCCCT
TCTTTTGCAGACGACTAAGGGCGGAAGCATTCCGTGGCTGAGTGCGGATG
TTTTCGAGACTCATGTCAGCCGGAAGCCACAGGTGCTCCAATTCACACTG
TCCACAATGGAACAAATGACCGAGGCACTTACGCATTGGAACAGTGGTGG
GGGTCGCGGACTGAGCGACTACGTAGGACTACCAGGACATCTAAATATTC
TCCTGCTACGAGATCCCTGTGAAACAACGCCTTCCGGAGGTAACGACAGG
GATATACTGCCGTTGTTTACGAGAAGGGGCAAGGAATCGCTCTCTTCGGA
GCGCTACATGGAAATAGTAGCAAGTTTCAAGCCGGACATGTATGAGGGAC
TCTGCGATGCGGACACAAATTTAGAGAGTGCCAAGAAGCGGGTTCAGAAA
TCGGTTGACAGGACAGAGAAGTTTATGCAATACATCTACGAGCACCGGGG
CAAGGTGAATTCCACTCTGCTAGCTCCCATTGTGGGCGGATACAACACCT
TTGCTCGGACGCAGTCCATTAAACATGCCCGGAACAGCCAGCGGGAAGCT
ATGGAGTTACATCTTCGAGGGTTTCCACGCGAATGGTCTATCAGCGACAC
TTTGGACACTTCAAACTACTGCAATAGTAGAGCACTGCGTCAGCAGCTGA
GAGACAAGCTAAGATATTGCGGTGCATACCCGCCCCTACGTCTGACTAAT
CACAGATCGATGTGTGACCTCCTACGCTATTGGGGCTTCTCTAAACTCAG
CTTGTCATTAGTTGGGCAGGATGC
UFO01666.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:12:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3434-RA | 1372 | CG3434-RA | 83..947 | 9..847 | 3660 | 96.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:12:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 9459979..9460717 | 742..9 | 3445 | 99.3 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:12:28 has no hits.
UFO01666.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:21:55 Download gff for
UFO01666.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3434-RA | 74..821 | 1..742 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-17 12:48:48 Download gff for
UFO01666.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3434-RA | 49..796 | 1..742 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:09:21 Download gff for
UFO01666.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3434-RA | 74..821 | 1..742 | 98 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:09:21 Download gff for
UFO01666.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 9459979..9460721 | 1..742 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:21:55 Download gff for
UFO01666.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 9453079..9453821 | 1..742 | 98 | | Minus |
