UFO01668.5prime Sequence
1093 bp (993 high quality bases) assembled on 2008-10-17
> UFO01668.5prime
CAGTCGACATGTCGACGCTGGAGCTGTGCGAAAAGTATTTTGGGACGCGC
GATGTGTACAAGCTAATGGAGCTGGCCCGGGGCGCCGGCGAGAAGGAGGT
GAAGAAGGCATACCACAAGCTCTCGCTGCTCGTTCATCCCGATCGAGTGC
CGGAGGAGCAGAAGGCGGAGTCCACCGAGAAGTTCAAGGTGCTATCGAAG
CTCTACCAGGTGCTTACCGACACGCAGAAGCGGGCGCTGTACGACGAGCA
GGGCGTGATCGACGACGACGATGAGAGCGAGTCCAAGCTGTCGTCGTGGC
TGGAGTTGTGGAGCAAAATCTTCAAGCCCATCACCGAGGAGGATATCAAC
AACTATGAAAAGGAGTATGTGGAATCGGAGCTGGAGCGCACCGATCTGAA
AAAGGCGTATCTGGGCGGCAAGGGTTGCATCAACTATCTGATGAACCATG
TGCCCTTCATGAAGGTGGAGGACGAGCCGCGCATTCAGAAGATCGTTCAG
GATATGATTGCCAGCGGCGAGGTGCCCGAGTACAAGATCTTTACCGAGGA
GCCGGCAGCCAAGCGCAAGAAGCGCCACCAGAAGTACGCGCGCGAATTCA
AGGAGGCCAAGGTGATCAAGGAGCGTTTGAAGCGCCGCCAGAAGGAGAAG
GACGACCAGGATTTAGCCGACAACGGTGGCGATTTGCAGCAAATGATCCT
GGCACGTCGCAATCAGCGCGAGTCAAACTTTGGCTCCCTAATGGACCGCC
TGATGGAGAAGTACGGCAACGAGGACGACTCCGACACTGTTGACTTCAGC
GCCTTCGAGAAGAAGAAAAAGAAGTCCAAGAAGCCCGCCGCCAAGCAGAG
ACCAAACCGAAGCTCAATGGAGTCAAGCGGGCCGTGTGAGAAGGCAAAAA
CGCAAGCTTTCTAGACCATTCGTTTGGCGCCGCGGGCCCAGGTAGTGGTC
ATATCATATCATAATCATATCATATCACAACTAGGCCTAGGAGATCTGGT
CATGACTAGGTGCTTGGATTCTCACCAATAAAAACGCCCGGCGCACGGAG
CGTTCTGAACAATTCGATGGTTCTGAGTCATAACTGATCTATC
UFO01668.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:00:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6693-RB | 1250 | CG6693-RB | 114..1010 | 9..901 | 4385 | 99.6 | Plus |
| CG6693-RA | 1372 | CG6693-RA | 236..1132 | 9..901 | 4385 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:00:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 11220523..11221404 | 888..9 | 4310 | 99.8 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:00:15 has no hits.
UFO01668.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:22:22 Download gff for
UFO01668.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6693-RA | 231..1132 | 1..901 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-17 12:49:00 Download gff for
UFO01668.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6693-RA | 231..1132 | 1..901 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:45:51 Download gff for
UFO01668.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6693-RA | 231..1132 | 1..901 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:45:51 Download gff for
UFO01668.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 11220508..11221408 | 1..901 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:22:22 Download gff for
UFO01668.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 7046230..7047130 | 1..901 | 99 | | Minus |
