Clone UFO01690 Report

Search the DGRC for UFO01690

Clone and Library Details

Library:UFO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2008-06-20
Comments:BD Creator expression clones with C-terminus FLAG HA tag for transgenic expression using PhiC31 integrase system
Original Plate Number:16
Well:90
Vector:pUAST-CFLAGHA-BD-PHI
Associated Gene/TranscriptEnt1-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

UFO01690.5prime Sequence

200 bp (173 high quality bases) assembled on 2008-10-17

> UFO01690.5prime
CAGTCGACATGCCAGGCACCAGTGACACACGACGACTGGTGGACGCCCTG
GACGAGGATGACGAGATTCTGGGCACGGAGGGCAGCTTCGTTCCCGCTTT
TCGTCCGCAGGACCACCCATGCGGATGAGCAATGTCTCATGGGAACGCCC
AGCCAGGGACGAAGGGTAGTTTTTTGGTTGTTCCCAACGGAACCCCGAAG

UFO01690.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:27:06
Subject Length Description Subject Range Query Range Score Percent Strand
Ent1-RC 1905 CG11907-RC 122..279 9..173 660 95.8 Plus
Ent1-RB 1923 CG11907-RB 140..297 9..173 660 95.8 Plus
Ent1-RA 1972 CG11907-RA 189..346 9..173 660 95.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:27:04
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 357554..357686 142..9 620 99.3 Minus
Blast to na_te.dros performed on 2014-11-28 22:27:05 has no hits.

UFO01690.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:02:45 Download gff for UFO01690.5prime
Subject Subject Range Query Range Percent Splice Strand
Ent1-RA 181..339 1..165 94   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-17 12:50:05 Download gff for UFO01690.5prime
Subject Subject Range Query Range Percent Splice Strand
Ent1-RA 175..333 1..165 94   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:14:52 Download gff for UFO01690.5prime
Subject Subject Range Query Range Percent Splice Strand
Ent1-RA 181..339 1..165 94   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:14:52 Download gff for UFO01690.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 357536..357694 1..165 94   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:02:45 Download gff for UFO01690.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 357536..357694 1..165 94   Minus