Clone UFO01691 Report

Search the DGRC for UFO01691

Clone and Library Details

Library:UFO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2008-06-20
Comments:BD Creator expression clones with C-terminus FLAG HA tag for transgenic expression using PhiC31 integrase system
Original Plate Number:16
Well:91
Vector:pUAST-CFLAGHA-BD-PHI
Associated Gene/TranscriptCG2608-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

UFO01691.5prime Sequence

284 bp (239 high quality bases) assembled on 2008-10-17

> UFO01691.5prime
CAGTCGACATGGATCTGCTCGACTCAATACTCAACGCCATGGATGCGCCG
CCTGCCAACAACGAGCAACAGAAGACGCTGATCAAGAAACAGCGCGAAAT
GTTAGAGCGGATGCAGAACAAACAGAAAGAGGAGCTCCTCCGATTCCGAA
AATATGTAGACGAACGGATGGGGGCGATTCGCCAAGGACGACAGGGCGAT
GCATCGAGTTTCAGCCGCTGGATAAAGTGCATCGCCTCGGTGATCCACGA
AGTAGCCGAAAAGGGCGGGCTTCATTGCCATGAG

UFO01691.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:09:08
Subject Length Description Subject Range Query Range Score Percent Strand
CG2608-RA 1477 CG2608-RA 191..462 9..284 1265 98.2 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:09:06
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 20646095..20646366 9..284 1165 98.2 Plus
Blast to na_te.dros performed 2014-11-28 23:09:07
Subject Length Description Subject Range Query Range Score Percent Strand
297 6995 297 DMIS297 6995bp Derived from X03431 (g8146) (Rel. 36, Last updated, Version 2). 6493..6536 114..157 103 70.5 Plus

UFO01691.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:18:10 Download gff for UFO01691.5prime
Subject Subject Range Query Range Percent Splice Strand
CG2608-RA 191..462 9..284 98   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-17 12:50:06 Download gff for UFO01691.5prime
Subject Subject Range Query Range Percent Splice Strand
CG2608-RA 189..460 9..284 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:51:41 Download gff for UFO01691.5prime
Subject Subject Range Query Range Percent Splice Strand
CG2608-RA 191..462 9..284 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:51:41 Download gff for UFO01691.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 20646095..20646366 9..284 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:18:10 Download gff for UFO01691.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 20646095..20646366 9..284 98   Plus