UFO01692.5prime Sequence
1072 bp (964 high quality bases) assembled on 2008-10-17
> UFO01692.5prime
CAGTCGACATGAAGCCCGTTGCCTTGATCCTGGTTTTCCTGGCCATTAGC
CAAGCCAGAGTACTCAACTTGCCCAAGGAGGCGATCGATATTCCTGTGGC
CATTGTCGAGGATAAGGAGCCACCAGTAGCTTTGTCTTTGGTCAAAGAGG
AAGTTAAGGCAGAGGAAGTTAAGCCAGAGGAAGTGAAACCAATTGCTCAA
GAAGAGAAAGCCAAGGATCTCAAGGAGGAAGTTAAGCCAGAAATTAAGCC
TGAAATCAAAGAGCAGCCTAAGCCTGATATAAAAGACGAGATTAAGGAAG
ATTTAAAGGCAGACATTAAGGAGGAGCTCAAGGAGAAGATTGAAGAGCAG
ATCAACGAGTTGCCTAATGCTAAGCCCCTGGAGCTGAAGGAAAAATCCCT
GGAAGCTGAGGAGAAACCTCAGGAAATCAAAGAAGAAGTTCAGCAGCCAG
AAATCAAAAAAGAGGCCACTGAAATCAAAGAGGAACCTGCTCAGAACATT
CTGAAATCTCTGCCAGCTGAAGAGACTGTCGTTGTGCCTGCCGAGGAACT
TTCCCCGAATCCGGTGGAGCAAGAGCAGTCGGAAAACCAGGACGCCGCGC
ATCCTCAGGTCCGTCAAGCCACCCAAGCCACGCCCACCCAGCAGAGCACC
ACCCAGGGCAACTTTGTCCAGCAGTTGATCCAGAACTCGCCAATTGGTCA
GTTCCTCAATCAGTTCCAGCCCCAGCCAGCTGCTGCTGCCGCTCCAGCAG
CAGCACAAGTCCAGGCGGATGATGCCGCCGCTGCGGCACCTGCAACTCCG
GCTCCCACGGTGCCCGGGTTTCCTGAATCCCCAGGCGCATCACTCGCCCA
ACAGGCGTGCAAAATGCGGCCCAAAGTGCGTCAATGCACCACCCAGGCTT
CAGGCATCACAGTTGCAGCACTGGGCATCAGTCAGACACCTGTCAGCTGA
CTGCAGCAGCAGCAGCGGGTCACATCCGGTCACAGTCATCAGCATTGCAC
ATGTTCGTGCATAACATGCCAGTGCGAACGCTGCAGCATTGCATCTCTGA
GATCCAGTCCTGGCCCATCGTC
UFO01692.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:09:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| ImpE2-RA | 1708 | CG1934-RA | 80..1060 | 9..965 | 4300 | 97.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:09:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 3511707..3512602 | 898..9 | 4125 | 98.9 | Minus |
Blast to na_te.dros performed 2014-11-28 23:09:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dmer\R1A3 | 3772 | Dmer\R1A3 MERCR1A3 3772bp | 628..712 | 713..797 | 137 | 62.4 | Plus |
UFO01692.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:18:12 Download gff for
UFO01692.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ImpE2-RA | 73..996 | 1..914 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-17 12:50:07 Download gff for
UFO01692.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ImpE2-RA | 69..992 | 1..914 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:51:41 Download gff for
UFO01692.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ImpE2-RA | 73..996 | 1..914 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:51:41 Download gff for
UFO01692.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 3511728..3512609 | 1..879 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:18:12 Download gff for
UFO01692.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 3511728..3512609 | 1..879 | 98 | | Minus |
