UFO01711.5prime Sequence
1106 bp (959 high quality bases) assembled on 2008-10-27
> UFO01711.5prime
CAGTCGACATGGGCGATGCTGATCGTGCGATGAACGAACCAGAAGCCGCG
AAAACTGTGTCCGGAATCCAGGTGATTCCCGCCGAGGATGTGGCTTCCAT
TGAGGATATAATCACAATCGATCCGGACTGCTACGAGCTTGATCTGAATC
ATCGCCGGATCGAGAAGCTGGAGAACTTCGAGCCGCTGACTCGAATCGAG
CGCCTGTTTCTGCGCTGGAATCTGATCAAGAAAATCGAGAACTTGTCCAG
CCTGAAAACACTGATTGAGCTGGAGCTGTATGACAACCAGATCACCAAGA
TTGAGAATTTGGACGACTTGCCCCACCTGGAGGTGCTGGACATTAGCTTC
AATCGTCTGACGAAGATAGAGAACCTTGACAAGCTGGTCAAGCTGGAGAA
GGTCTACTTTGTGTCGAACCGGATAACCCAAATCGAGAACCTGGACATGC
TCACCAATCTGACCATGCTAGAGCTGGGGGATAACAAACTGAAGAAGATC
GAAAACATCGAAATGCTCGTGAATCTACGACAGCTCTTCCTGGGCAAAAA
TAAGATAGCAAAGATCGAGAACTTGGACACATTGGTCAATTTGGAGATAC
TCAGTCTACAGGCCAATCGCATTGTAAAAATCGAGAACCTTGAAAAGCTT
GCCAACCTCCGCGAACTCTACGTTTCGGAAAACGGAGTGGAAACCATTGA
AAACCTCTCGGAGAACACCAAATTGGAGACCCTCGACTTGGCCAAGAACC
GGTTGAAGGGCATTGCCAATCTGGAAAAGCTGGAACTGCTCGAGGAGCTG
TGGCTGACCACAACGGAGTCGATGACTGGAAGGACATTGAGCTGTTGAAG
TGAACAGCGCTGCAGACCATCTACCTGGAGTACATCGCTGGCAAGGATGT
CGCTACCGCTCAAACTGCGCGACATACTGCGCAGCTGCAGAAGATGATGC
CACCCTGTGCAGTGCCCGTACGCAGGCTTCTAGAACATTCGTTTGGCGCG
CGGCCAAGTAAGTGGTCATAATCTATCCTAATCTATCTAATCCACACTAG
CCTAGGATCTGGCCATGACTAGGGCTTGGAATTCTCACAATAAGACGGGC
GGGGTC
UFO01711.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:14:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| sds22-RA | 1354 | CG5851-RA | 262..1235 | 8..968 | 4565 | 98.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:14:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 17391928..17392892 | 8..961 | 4330 | 98.8 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:14:42 has no hits.
UFO01711.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:14:03 Download gff for
UFO01711.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| sds22-RA | 186..1167 | 1..971 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:22:32 Download gff for
UFO01711.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| sds22-RA | 258..1239 | 1..971 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:10:25 Download gff for
UFO01711.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| sds22-RA | 258..1239 | 1..971 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:10:25 Download gff for
UFO01711.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 17391924..17392912 | 1..986 | 97 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:22:32 Download gff for
UFO01711.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 13217646..13218634 | 1..986 | 97 | -> | Plus |
