UFO01712.5prime Sequence
1042 bp (938 high quality bases) assembled on 2008-10-27
> UFO01712.5prime
CAGTCGACATGTCGTTGCCACGCGTTTACTTCGATATAGCCGCAGGAGGT
GAGAAGTTAGGTAGAATTGTGATGGAACTACGTTCGGATGTGGTGCCCAA
GACGGCGGAGAATTTCCGGGCCCTCTGCACCGGAGAGAAGGGGTACGGCT
ACAAGGGATCACCATTCCACCGCGTCATCCCGAATTTCATGTGTCAGGGC
GGTGATTTCACTAATCAAAACGGAACTGGAGGACGCTCCATTTATGGAAA
CAAGTTTCCCGATGAGAATTTCGAGCTAAAGCATACCGGAGCTGGTGTAC
TTTCGATGGCCAATGCTGGGGCCAATACCAATGGATCTCAGTTTTTCATT
TGCACCGGGAAAACCACATGGCTGGATAATAAGCATGTCGTGTTCGGCAA
GGTCGTTGAGGGAATGGATATCGTCCAGAAGGTAGAATCTTACGGTTCAC
AAGATGGGAAGACCAGCAAGAAAGTAATTATCGAAGACTGCGGAGCCCTC
GCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCA
TAATCATAATCATAATCATAATCATAATCACAACTAGCCTAGGAGATCCT
GGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAA
CCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGGATC
TATCAACAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCCCGCCCTGC
CACTCATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCGACATGGAA
GCCATCACAAACGGCATGATGAACCTGATCGCCAGCGGCATCAGCACCTT
GTCGCCTTGCGTATATATTTGCCCATGGTGAACGGGGCGAGAGTGTCATA
TGCCACGTTTAAATCAAACTGTGAACTCACCCAGGATGGCTGAACGAAAA
CATATCTCAATAACCCTTTAGGATAGCAGCTTCACGTACACGCATCTGCA
ATATTGTGTAGAACCTGCGAATCGTCTGTATTAACCCGACCG
UFO01712.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:28:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7768-RB | 679 | CG7768-RB | 88..579 | 9..500 | 2460 | 100 | Plus |
| CG7768-RA | 717 | CG7768-RA | 126..617 | 9..500 | 2460 | 100 | Plus |
| Cyp1-RA | 1227 | CG9916-RA | 287..687 | 72..472 | 745 | 79.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:28:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 14218383..14218874 | 9..500 | 2460 | 100 | Plus |
| X | 23542271 | X | 16318213..16318598 | 472..87 | 730 | 79.3 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:28:24 has no hits.
UFO01712.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:14:00 Download gff for
UFO01712.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7768-RB | 467..971 | 1..505 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:03:10 Download gff for
UFO01712.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7768-RA | 117..621 | 1..505 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:15:31 Download gff for
UFO01712.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7768-RA | 118..622 | 1..505 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:15:31 Download gff for
UFO01712.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 14218375..14218874 | 1..500 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:03:10 Download gff for
UFO01712.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 14211475..14211974 | 1..500 | 99 | == | Plus |
