UFO01719.5prime Sequence
1144 bp (967 high quality bases) assembled on 2008-10-27
> UFO01719.5prime
CAGTCGACATGAAAAACCAGGATTTGGTGGAATATTTAAGGTCGTGCGGG
GTGTGCGAAATTTGCCAGCTGCGTTACCTGAAGGCCAGAGGCGCGGAGTA
TAGAAACATCAATGAGACTTTGCAAAAGTTGGATGTAAAACTAAATGAAA
ATGTGGAAAACGAAGAGCTTGTTATATCCGAAGGGAGTCAACCATCTAAA
AGGGCCCGTCTGGGCGTGTGTTCAACGTGCCTGGGTTTATTCTCCAAAGA
CTTTCAGAATGAGCTGCTCAGCAGCATTTTGGCATCGGATTTCGCGAAAT
ACGATTGCCAGAAAATCGTTCTGGCGATTTGTCTACCGATGTCGCTTCAG
TTGAGACAGCTGGCCATGTGGTTTGCCTTGCGAAGAAGATTTGGACCATC
TATAGACGAAAACAATCCCCCAGACGTGCCTATAAAAGAGGCTGTCAAGC
TGATCCTACACCCTATAATCTGTGAAAAGCTGGCCAAGGTTTACGATGCC
AACGGTCTGATGATCAATATAGACCTCACGCACAGTCTGGAAGGCGAAGA
GGTGGAAAAACTGGTCAAATTAAACAAAGAAGCCTTTCCCGCCAAGGCCT
CGCATCAAAAGCGCATTGAAATTTCGCGAGGTTTACTAGAGAAACAGTAT
CAACCCTCCAAAGTTAAGGCGGAAACCTATGAGAAATATTTTCAGATACC
CTGCTCTAACGTAGAGGAATCTATAAAACTTACTTCCATAGACCTGCAGG
GACCATTGATTTGTGTAGCTGGCAGATATCGAAAGCTGAGCAGGGAACTT
TCACATACTCCCTGTATTTTGAATGGCCAAAGGCTCATGGAGGACAGTAT
CGAGGAATTATAATTAGGCATGTCGGTCCCCACTTTACAGAGAAGCTGGG
CAAATCACCTTCATGTCGAGTGCAGAGAGATGTGGACGTCCGATGCCTGG
GGAAAGAAGCTTTTGTTCTAAAATTCAATGCAAGAGTGCTACTAAGATGA
GCTTGCGATGACGGCTGTGATGCTCTGTTGTGTCTTTATCACCTCAGTCT
GCGAGAGAATACCAATAAGACGAAAGACGAAAGAATTCTATCGGCGTGCT
GAACGTCCGTAGATCGGAACCTGCATTACAAGCTTAATTACACA
UFO01719.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:20:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3709-RA | 1699 | CG3709-RA | 59..1034 | 9..976 | 4675 | 99.1 | Plus |
| CG11455-RJ | 869 | CG11455-RJ | 40..159 | 128..9 | 600 | 100 | Minus |
| CG11455-RK | 798 | CG11455-RK | 40..90 | 128..78 | 255 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:20:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 154228..155061 | 956..127 | 3955 | 99.4 | Minus |
| 2L | 23513712 | 2L | 155128..155247 | 128..9 | 600 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:20:26 has no hits.
UFO01719.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:13:44 Download gff for
UFO01719.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3709-RA | 68..1050 | 2..976 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:29:04 Download gff for
UFO01719.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3709-RA | 52..1034 | 2..976 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:07:01 Download gff for
UFO01719.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3709-RA | 52..1034 | 2..976 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:07:01 Download gff for
UFO01719.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 154228..155059 | 129..956 | 99 | <- | Minus |
| 2L | 155128..155251 | 2..128 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:29:04 Download gff for
UFO01719.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 155128..155251 | 2..128 | 96 | | Minus |
| arm_2L | 154228..155059 | 129..956 | 99 | <- | Minus |
