UFO01724.5prime Sequence
1153 bp (1012 high quality bases) assembled on 2008-10-27
> UFO01724.5prime
CAGTCGACATGATATCGCGCAAACTACTAAACCTTCGACTGGGTTACCTG
GCACGCCGTTGGGCCAGCACGGATCCGCTGAGCATTCAGAACGAGAAGCT
GCAGGCTTATTTGGAGTCTCTACGCCAGGAATACTACGCCGTGCGAGTCA
ACGCCGCCGGAAACAGCAAATCCTACGCCCGTCTCGCCCAGCTGGAGGGC
GTGGTCAGTGCCCTGGAGCAGCGACGCGTACTAGAACGGCACATCACCAG
CGCCAAGGACATGGAAGCGGAGAAGGACGAGGATATGCGTGAGCTAATGC
GCGAGGAGAACGAAGTCTATGTGGATCTACTGGGCAAGCAGGATCAGGCC
TTACTGCAGGAGCTGCTTACGCTCTCTGACGATGAGGAGTATCCGGCTCT
GATCTTCGGCCTGAATGCCGGCGCCGGTGGCCAGGAGGCAATGCTATTCG
CCCAAGAATTGTACGAAATGTACACCGGCTATTTCGAGCACATGGGCTGG
GAGTGGGAGGAGTTTGCCAGCGAGGGCACCGACATCGGGGGTCTGCGGCA
CGCTAGTCTGATGGTGAGCGGCGAGGATGCCTTCCGCTGGCTGCGCTATG
AGGCTGGAGTTCACCGCGTACAGCGGGTGCCGGCCACTGAAAAGTCTGGA
CGCATGCACACCAGCACCGCCTCAATTACAGTGATTCCCCGACCCGCCGA
CATCCAAGTGCACATCGCTGAGAAGGATCTGAAGATCGAGACGAAGCGAG
CGAGTGGAGCTGGTGGACAGCATGTTAACACCACCGACTCGGCTGTAAGA
ATTGTTCATCTGCCCACGGGTCTGGCGGTGGAGGCGCAATCGGAACGCTC
CCAGCTCAAAAACCGGGAGCTAGCGATGAAGCGTCTACGGTCGCGACTTG
TGCAACAGCAGTTGGAGAAGCGTTGAAGCTAGCAAAATGGCCACCAAGAA
GGCGCAACAGGGTAGTCTCAATCGCAATGAAAAAAATCGTACCTAACAAT
TTCGTCAAGAACCGCATAACGGATCATCGAATCAAGGCGGTACGCTGCAC
AAACCCTCAATGGCTTCCTCAAAGGCGGCGAACCAACTGAGTGAAATATA
TTAGAGAAAGTTGCCAACCTGGAACACTCTCGAAAGGAACGGCACTAAAA
GGA
UFO01724.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:35:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5705-RA | 1420 | CG5705-RA | 109..1229 | 9..1141 | 5170 | 97.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:35:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 13220087..13221167 | 9..1093 | 5030 | 98.6 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:35:35 has no hits.
UFO01724.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:13:52 Download gff for
UFO01724.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5705-RA | 92..1198 | 1..1114 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:49:38 Download gff for
UFO01724.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5705-RA | 101..1207 | 1..1114 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:11:41 Download gff for
UFO01724.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5705-RA | 101..1207 | 1..1114 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:11:41 Download gff for
UFO01724.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 13220079..13221187 | 1..1116 | 97 | <- | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:49:38 Download gff for
UFO01724.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 13220079..13221187 | 1..1116 | 97 | <- | Plus |
