UFO01730.5prime Sequence
1176 bp (1009 high quality bases) assembled on 2008-10-27
> UFO01730.5prime
CAGTCGACATGAAATACGAATATAAGCTGCTGGCCACGGATGAGAAGCCA
CCGCGGCGGAAAAGTAGCGGATCACCAAATGCCAGCAGTGGTGGAAACCG
CGGGCCCAGCGGCCTCAAGATCTCCTTCCTGTGCCTGATCATCTCCGTCA
TCCTCCTGCTCTTTGTCTTTGGCTTCGTCTCCGAGAACGCCAGTCCGTAT
CTGGCCCGTTTGGCCTCCAAGTTTGGCTACAGCAAGGTGCAGTATGCGGC
CATCATCGATGCCGGATCGACGGGCAGCCGTGTGCTGGCCTACAAGTTCA
ATCGCAGCTTCATCGACAACAAACTGGTGCTGTACGAGGAGCTGTTCAAG
GAGCGCAAGCCGGGTCTGAGCTCCTTCGCGGATAATCCCGCCGAGGGTGC
CCACTCCATCAAACTGCTGCTGGACGAGGCCCGCGCCTTCATACCCAAGG
AGCACTGGTCTTCCACACCGCTGGTTCTGAAAGCGACCGCCGGCCTGAGA
CTCCTGCCCGCCAGCAAGGCGGAAAACATTCTAAATGCCGTCCGAGATCT
CTTCGCCAAGTCCGAGTTTAGTGTGGATATGGATGCCGTGGAGATCATGG
ACGGCACGGACGAGGGCATCTTCAGCTGGTTTACCGTGAACTTCCTGCTG
GGCCGCCTGTCCAAGACGAACCAGGCAGCTGCCTTGGACTTGGGCGGCGG
TAGCACGCAGGTAACCTTCTCGCCAACGGATCCGGACCAGGTGCCCGTGT
ACGATAAGTACATGCACGAGGTGGTCACGTCCAGCAAGAAGATCAACGTC
TTCACGCACAGCTATCTGGGACTGGGTCTAATGGCTGCACGCCATGCTGT
CTTCACGCACGGCTACAGAAGGAGGATACGTGCTGGAGAGCGTCTGCGTG
AATCCCATAATCGCATCGCACGTGGACTACGGCATGTGCAGTACAAGGTC
AGCGCAAGGAGAATGGCAAGTCCAGTGCCGAGCAGCCCATTGTGGACTTC
GATGCTGCCTGACTGGTCAAGAACAGTAATGCGCTGTCAGCCAGCGTTCA
CACTCAAGCGCACGCGGGGCGCGTCAGCTATACTTGAGCGGCATCGTCGG
CTGGGATCCTGGCTGGCGCGACCTGACTAGCTAAGGCCAGACTTGGCATC
CTAGATGAACGCCCCTCATGTGGCGT
UFO01730.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:35:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| NTPase-RA | 2095 | CG3059-RA | 186..1293 | 8..1091 | 4955 | 97.7 | Plus |
| NTPase-RC | 2182 | CG3059-RC | 293..1379 | 29..1091 | 4850 | 97.7 | Plus |
| NTPase-RD | 2107 | CG3059-RD | 218..1304 | 29..1091 | 4850 | 97.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:35:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 2881671..2882512 | 1005..171 | 3895 | 99.2 | Minus |
| 2L | 23513712 | 2L | 2882691..2882834 | 172..29 | 720 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:35:35 has no hits.
UFO01730.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:13:36 Download gff for
UFO01730.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| NTPase-RA | 173..1273 | 8..1085 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:05:23 Download gff for
UFO01730.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| NTPase-RA | 186..1286 | 8..1085 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:19:16 Download gff for
UFO01730.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| NTPase-RA | 186..1286 | 8..1085 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:19:16 Download gff for
UFO01730.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 2881575..2882511 | 172..1085 | 97 | <- | Minus |
| 2L | 2882692..2882833 | 30..171 | 100 | <- | Minus |
| 2L | 2882920..2882941 | 8..29 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:05:23 Download gff for
UFO01730.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 2881575..2882511 | 172..1085 | 97 | <- | Minus |
| arm_2L | 2882692..2882833 | 30..171 | 100 | <- | Minus |
| arm_2L | 2882920..2882941 | 8..29 | 100 | | Minus |
