UFO01732.5prime Sequence
1180 bp (1012 high quality bases) assembled on 2008-10-27
> UFO01732.5prime
CAGTCGACATGTTGTGCATTGATCCGCTGGACTCACAGCTCACCAAAGCT
GTGGCCGACTCCGAGCTCAAGGAGGTAGTGGTTGACACTAACTGCGGAGC
TGCACTACTGCGAGGCGCCCACATATACGCCCCCGGTGTTTTAGCTATGG
AGTCAAACACTGAGCGGGAGGAACTCGTCAATGTCTACGCAGATCTGGAT
GGAAAATGCAAGCGCGGGACGGTCAAGCGGTACGAAAGCCCAAATAAGGT
TTTCCTGGGTACAGGCAAGGTGTTAATGCAGCGGTATCAGCTGTTCAACA
ACGCGGAGAAGCCCGCCTCTGGAGTGGCCGTGGAAATGCAGTCCAACGTC
AGCGGAGTGCCCACGCTGGGGGATCTAAGCAGCGAAGACGGCCTGTTGCA
AAACCTGCCTTCTATTGTTTGCGTCCGTGTCCTGGATCCGCAGCCCGGCG
AGCGCATACTGGACATGTGTGCCGCTCCGGGTAACAAAACAAGCCACATA
GCCGAGTTGATGGGCGATCGGGGATCTGTGGTGGCCCTAGACAATTCGGC
CAGTCGCGTCCGCAGCATGCTGCCCAAATTGGGACACTACAAAAGCATAA
CGGCGCATGTTTTTAACTCCACCGAGGCAGTGGCAGCGGACGCTCCATCT
GCACCCGTGGGAGAATTCACTGGGCCTCCGTTTCCATGTGAAAGCTTTGA
CCGAATCTTGCTCGATGCACCCTGCAGTGGGCTGGGCAACCGGCCACAGT
TGTCCTGCAGCATTAAACAGGTTAAGGTCTTGTCCTCATATCCCCATATT
CAGCGCCGGCTATTTGAACAGGCAGTGCAGCTCGTTCGTCCTGCGGCATC
CTTGTATATAGCACGTGCACCGTCACCGAGGATGAGTGCGATGTCTTGTG
GCCTGGGCACTAGAAAATTTGTCGAGCTGCGGCTAACAGATGCCACTCCC
CGGTGGGGGCGGTCCCGGACTTCCGCTTCCCGGTTTCGAGGCATGTAAAT
CTCGTCTGTTGCAACGCTTCGGTCCAAGCGGAGCAAATGCGGAACCTGGT
GGCTTTTTTATGCGAAGTTTCGAAATAGCAGCTTCTGAACATTCGTTTGG
GCGCGGCAGTATGGCTAACTAACCTACTACTATCACATGGCTAGGAATCT
GGCTGACATAGGCTGAATCTCACATTAAAG
UFO01732.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:29:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11109-RA | 1445 | CG11109-RA | 351..1420 | 5..1071 | 5140 | 99 | Plus |
| CG11109-RB | 1415 | CG11109-RB | 321..1390 | 5..1071 | 5140 | 99 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:29:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 22872608..22873677 | 5..1071 | 5015 | 99 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:29:24 has no hits.
UFO01732.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:09:00 Download gff for
UFO01732.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11109-RA | 346..1425 | 1..1075 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:47:40 Download gff for
UFO01732.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11109-RB | 316..1395 | 1..1075 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:08:18 Download gff for
UFO01732.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11109-RB | 316..1395 | 1..1075 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:08:18 Download gff for
UFO01732.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 22872603..22873656 | 1..1049 | 98 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:47:40 Download gff for
UFO01732.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 22865703..22866756 | 1..1049 | 98 | -> | Plus |
