UFO01740.5prime Sequence
1161 bp (1004 high quality bases) assembled on 2008-10-27
> UFO01740.5prime
CAGTCGACATGCTCCACTCCGTCGTTAAGGGCGGCTGCCAGCTCGCCGTT
GAACTGCAGCAGGCAACCCAGAGCCCCAAAGTATCCCTCGTGCTCCAGGA
AAAGACCCTTCATTGTGCCATTGGACCAGAACTCCATTGCGTACGCCAGC
AGCTTCATGGAAATGGGGTTAACTCGCAGAAAGTTGCCCACAAAGACGAC
CTGAAATGGGTTTGTTGCTCAGTCTACGAGGATATGTATGTAACGAAAAT
TGATACTTACCCTATCGATCTTCTCATTCAGCGCGCACATCCTTGCTATG
GAGCCGATATTATTCGTTATGGTGACCAGAGTGGCGTTGGCCAGATCTTC
GCGGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGG
TCATAATCATAATCATAATCATAATCATAATCACAACTAGCCTAGGAGAT
CCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGG
CAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGG
ATCTATCAACAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCCCGCCC
TGCCACTCATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCGACATG
GAAGCCATCACAAACGGCATGATGAACCTGAATCGCCAGCGGCATCAGCA
CCTTGTCGCCTTGCGTATAATATTTGCCCATGGTGAAAACGGGGGCGAAG
AAGTTGTCCATATTGGCCACGTTTAAATCAAAACTGGTGAAACTCACCCA
GGGATTGGCTGAGACGAAAAACATATTCTCAATAAACCCTTTAGGGAAAT
AGGCCAGGTTTTCACCGTAACACGCCACATCTTGCGATATATGTGTAGAA
CTGCCGGAAATCGTCGTGTATTCACTCCAGAGCGATGAAACGTTTCAGTT
TGCTCATGGAACGTGTAACAAGGTGAACACTATCCCATATCCCAGCTCAC
GTCTTCATGCATACGAAATTCGGATGAACATCATCAGGCGGCAGATGTGA
ATAAGGCCGATAACTTGCTATTTTCTTACGCTTAACGCAATTCAGTGAAC
GCTGTTAGCATGACTGCGTAGTCCAAGTTCTCAAGTCATGGGATACACGG
GTATATCCTGG
UFO01740.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:28:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| fbl-RG | 2352 | CG5725-RG | 1324..1516 | 201..9 | 965 | 100 | Minus |
| fbl-RF | 1370 | CG5725-RF | 801..993 | 201..9 | 965 | 100 | Minus |
| fbl-RE | 2386 | CG5725-RE | 1358..1550 | 201..9 | 965 | 100 | Minus |
| fbl-RG | 2352 | CG5725-RG | 1232..1326 | 353..259 | 475 | 100 | Minus |
| fbl-RF | 1370 | CG5725-RF | 709..803 | 353..259 | 475 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:28:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 20390733..20391077 | 353..9 | 1725 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:28:03 has no hits.
UFO01740.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:08:48 Download gff for
UFO01740.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33969-RB | 2262..2612 | 1..353 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:03:04 Download gff for
UFO01740.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fbl-RE | 1266..1357 | 262..353 | 100 | == | Minus |
| fbl-RE | 1358..1555 | 1..201 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:15:22 Download gff for
UFO01740.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fbl-RE | 1266..1357 | 262..353 | 100 | == | Minus |
| fbl-RE | 1358..1555 | 1..201 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed on 2014-11-28 23:15:22 has no hits.
Sim4 to na_arms.dmel.RELEASE5 performed on 2013-08-05 01:03:04 has no hits.
