UFO01741.5prime Sequence
1152 bp (997 high quality bases) assembled on 2008-10-27
> UFO01741.5prime
CAGTCGACATGCAATTTCAGGGCATTTCATTCCGCTTGCGCGTAGTTGTT
GTTCCCGAACCCCAAGTAGATGTTTTTCGCAATGTTTGCGCAGTTGTGTG
GGCATTTGCATTTGTATCTGAGTGCGACTGTTTGAGTCCGGATTGCAGGG
GTGCGGATGTGTGTGGAAGTGTGAGTCGGCCAACCTGTTCGGAACTCAAG
GAAAATGAGTCAGCAACGCCGGGCCGGGCCGTGCCGGGCCGGGCTTTCGC
ATCCATGAGATACATTTCGAGTAGACGCCGTAAAGTGTTTACCGAGGACA
TCGAGGTCTGCGGGGTCCTTCTTCCTTTCGCAAGCTTTCTAGACCATTCG
TTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAA
TCATAATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGAT
TCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCC
AGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGA
GCTCGATATCAAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGT
AATTCATTAAGCATTCTGCCGACATGGAAGCCATCACAAACGGCATGATG
AACCTGAATCGCCAGCGGCATCAGCACCTTGTCGCCTTGCGTATAATATT
TGCCCATGGTGAAAACGGGGGCGAAGAAGTTGTCCATATTGGCCACGTTT
AAATCAAAACTGGTGAAACTCACCCAGGGATTGGCTGAGACGAAAAACAT
ATTCTCAATAAACCCTTTAGGGAAATAGGCCAGGTTTTCACCGTAACACG
CCACATCTTGCGAATATATGTGTAGAACTGCCGGAAATCGTCGTGTATTC
ACTCCAGAGCGATGAAACGTTTCAGTTTGCTCATGGAAAACGGTGTAACA
GGTGACACTATCCCATATCACAGCTCACCGTCTTTCATGCATACGAATCG
GATGACATCATCAGCGGCAAGAATGTGATACGCGATAACTTGTGCTTAAT
TTTCTTACGCTTGAAGCGTAATCACTGACGCTGGTAAGGTAACTGGACAC
TGACTGAAAGTCAGTCTCCAGTCATTGGATACGGAATACGGAATTTCCAT
AG
UFO01741.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed on 2014-11-28 20:34:34 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:34:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 10871266..10871587 | 329..8 | 1610 | 100 | Minus |
Blast to na_te.dros performed 2014-11-28 20:34:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
transib1 | 2167 | transib1 TRANSIB1 2167bp | 230..290 | 894..953 | 113 | 67.2 | Plus |
UFO01741.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:08:46 Download gff for
UFO01741.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30017-RA | 781..1110 | 4..336 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:11:08 Download gff for
UFO01741.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 10871266..10871589 | 4..329 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:11:08 Download gff for
UFO01741.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 10871266..10871589 | 4..329 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:49:20 Download gff for
UFO01741.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 6758771..6759094 | 4..329 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:49:20 Download gff for
UFO01741.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 6758771..6759094 | 4..329 | 99 | | Minus |