Clone UFO01741 Report

Search the DGRC for UFO01741

Clone and Library Details

Library:UFO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2008-06-20
Comments:BD Creator expression clones with C-terminus FLAG HA tag for transgenic expression using PhiC31 integrase system
Original Plate Number:17
Well:41
Vector:pUAST-CFLAGHA-BD-PHI
Associated Gene/Transcript
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

UFO01741.5prime Sequence

1152 bp (997 high quality bases) assembled on 2008-10-27

> UFO01741.5prime
CAGTCGACATGCAATTTCAGGGCATTTCATTCCGCTTGCGCGTAGTTGTT
GTTCCCGAACCCCAAGTAGATGTTTTTCGCAATGTTTGCGCAGTTGTGTG
GGCATTTGCATTTGTATCTGAGTGCGACTGTTTGAGTCCGGATTGCAGGG
GTGCGGATGTGTGTGGAAGTGTGAGTCGGCCAACCTGTTCGGAACTCAAG
GAAAATGAGTCAGCAACGCCGGGCCGGGCCGTGCCGGGCCGGGCTTTCGC
ATCCATGAGATACATTTCGAGTAGACGCCGTAAAGTGTTTACCGAGGACA
TCGAGGTCTGCGGGGTCCTTCTTCCTTTCGCAAGCTTTCTAGACCATTCG
TTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAA
TCATAATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGAT
TCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCC
AGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGA
GCTCGATATCAAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGT
AATTCATTAAGCATTCTGCCGACATGGAAGCCATCACAAACGGCATGATG
AACCTGAATCGCCAGCGGCATCAGCACCTTGTCGCCTTGCGTATAATATT
TGCCCATGGTGAAAACGGGGGCGAAGAAGTTGTCCATATTGGCCACGTTT
AAATCAAAACTGGTGAAACTCACCCAGGGATTGGCTGAGACGAAAAACAT
ATTCTCAATAAACCCTTTAGGGAAATAGGCCAGGTTTTCACCGTAACACG
CCACATCTTGCGAATATATGTGTAGAACTGCCGGAAATCGTCGTGTATTC
ACTCCAGAGCGATGAAACGTTTCAGTTTGCTCATGGAAAACGGTGTAACA
GGTGACACTATCCCATATCACAGCTCACCGTCTTTCATGCATACGAATCG
GATGACATCATCAGCGGCAAGAATGTGATACGCGATAACTTGTGCTTAAT
TTTCTTACGCTTGAAGCGTAATCACTGACGCTGGTAAGGTAACTGGACAC
TGACTGAAAGTCAGTCTCCAGTCATTGGATACGGAATACGGAATTTCCAT
AG

UFO01741.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed on 2014-11-28 20:34:34 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:34:32
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 10871266..10871587 329..8 1610 100 Minus
Blast to na_te.dros performed 2014-11-28 20:34:33
Subject Length Description Subject Range Query Range Score Percent Strand
transib1 2167 transib1 TRANSIB1 2167bp 230..290 894..953 113 67.2 Plus

UFO01741.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:08:46 Download gff for UFO01741.5prime
Subject Subject Range Query Range Percent Splice Strand
CG30017-RA 781..1110 4..336 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:11:08 Download gff for UFO01741.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 10871266..10871589 4..329 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:11:08 Download gff for UFO01741.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 10871266..10871589 4..329 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:49:20 Download gff for UFO01741.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 6758771..6759094 4..329 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:49:20 Download gff for UFO01741.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 6758771..6759094 4..329 99   Minus