UFO01747.5prime Sequence
1180 bp (1029 high quality bases) assembled on 2008-10-27
> UFO01747.5prime
CAGTCGACATGGGCTGCGCACAGTCTGCCGAGGAGCGAGCCGCAGCCGCC
AGGAGTCGCCTCATCGAGCGCAATCTCAAGGAGGACGGCATACAGGCGGC
AAAGGACATCAAACTCCTGCTGCTGGGTGCCGGTGAGTCGGGCAAGAGCA
CAATAGTCAAACAGATGAAAATCATTCACGAGAGCGGCTTCACTGCTGAG
GACTTTAAACAATATCGACCGGTTGTCTACAGCAACACAATACAATCATT
AGTTGCAATATTGCGCGCGATGCCAACCCTAAGTATTCAGTACAGCAATA
ACGAGCGGGAGAGCGATGCCAAGATGGTGTTCGACGTATGCCAACGCATG
CACGACACCGAGCCCTTCTCGGAGGAGCTGCTGGCCGCCATGAAACGCCT
CTGGCAGGACGCCGGTGTCCAGGAGTGCTTCTCGCGCAGCAACGAATACC
AACTAAACGATTCCGCAAAATATTTCCTGGACGATTTGGATCGGTTAGGC
GCCAAGGATTACCAGCCAACTGAACAAGATATCTTGCGCACTCGCGTCAA
GACCACTGGCATCGTTGAGGTACACTTCTCCTTCAAAAACCTCAACTTTA
AATTGTTTGACGTGGGCGGTCAGCGCTCGGAACGTAAGAAATGGATACAC
TGCTTCGAAGATGTCACGGCGATCATTTTCTGCGTGGCCATGTCCGAGTA
CGATCAAGTCTTGCATGAGGATGAAACCACGAACCGCATGCAAGAGTCGC
TGAAACTGTTTGACTCGATCTGTAACAACAAATGGTTCACGGACACCTCG
ATTATTCTATTCCTGAACAAGAAGGATTTGTTCGAGGAGAGATTCGCAAG
AGTCCCCTGACGATTTGCTTCCCCGAATACACAGGTGGACAGGAGTACGG
CGAGGCGGCTGCTTACATTCAGGCTCAATTTGAAGCGAAAACAATCAACC
TTCAAAGAAATCTACTGCCACATGACGTGTGCCACAGATACCCATAACAT
TCAGTTGTATTCGATGCTGTCACCGGATGTTAATCATAGCAAACAACCTG
CCGCGCTGTGACTGTACGCAAGCTTTCTAGAACATTCGTTGGGCCGGCGG
GTAAGTATGCATAATCTAATCATAATCTGATCTATATCACACTAGCCTTA
GGAGATCCTGGTACTATACACATGGCCTGG
UFO01747.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:35:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Galphao-RI | 5457 | CG2204-RI | 391..1453 | 8..1067 | 5015 | 98.6 | Plus |
| Galphao-RA | 3462 | CG2204-RA | 379..1441 | 8..1067 | 5015 | 98.6 | Plus |
| Galphao-RC | 2367 | CG2204-RC | 316..1378 | 8..1067 | 5015 | 98.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:34:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 10448198..10448383 | 126..311 | 900 | 98.9 | Plus |
| 2R | 25286936 | 2R | 10448470..10448632 | 310..472 | 815 | 100 | Plus |
| 2R | 25286936 | 2R | 10461289..10461446 | 731..887 | 740 | 99.4 | Plus |
| 2R | 25286936 | 2R | 10461096..10461225 | 602..731 | 650 | 100 | Plus |
| 2R | 25286936 | 2R | 10460903..10461031 | 473..601 | 645 | 100 | Plus |
| 2R | 25286936 | 2R | 10445506..10445627 | 8..129 | 610 | 100 | Plus |
| 2R | 25286936 | 2R | 10461510..10461680 | 882..1051 | 575 | 94.2 | Plus |
| 2R | 25286936 | 2R | 10439577..10439633 | 72..128 | 195 | 89.5 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:34:59 has no hits.
UFO01747.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:08:55 Download gff for
UFO01747.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| G-oalpha47A-RI | 100..1176 | 1..1072 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:49:27 Download gff for
UFO01747.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Galphao-RC | 306..1382 | 1..1072 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:11:22 Download gff for
UFO01747.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Galphao-RC | 306..1382 | 1..1072 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:11:22 Download gff for
UFO01747.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 10461513..10461701 | 885..1072 | 92 | | Plus |
| 2R | 10448199..10448383 | 127..311 | 98 | -> | Plus |
| 2R | 10448472..10448632 | 312..472 | 100 | -> | Plus |
| 2R | 10460903..10461031 | 473..601 | 100 | -> | Plus |
| 2R | 10461096..10461225 | 602..731 | 100 | -> | Plus |
| 2R | 10461290..10461443 | 732..884 | 99 | -> | Plus |
| 2R | 10445496..10445624 | 1..126 | 96 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:49:27 Download gff for
UFO01747.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 6349018..6349206 | 885..1072 | 92 | | Plus |
| arm_2R | 6333001..6333129 | 1..126 | 96 | -> | Plus |
| arm_2R | 6335704..6335888 | 127..311 | 98 | -> | Plus |
| arm_2R | 6335977..6336137 | 312..472 | 100 | -> | Plus |
| arm_2R | 6348408..6348536 | 473..601 | 100 | -> | Plus |
| arm_2R | 6348601..6348730 | 602..731 | 100 | -> | Plus |
| arm_2R | 6348795..6348948 | 732..884 | 99 | -> | Plus |
