UFO01750.5prime Sequence
1134 bp (928 high quality bases) assembled on 2008-10-27
> UFO01750.5prime
CAGTCGACATGGCCACCGTAAACGTAAACCGCAGTGTGACGGACATCTTC
TATCGCTACAAGATGCCACGTCTGCAGGCAAAGGTCGAGGGCAAAGGAAA
CGGCATTAAGACCGTGCTGGTCAACATGGCGGAAGTGGCTAGGGCCATCG
GACGCCCGGCCACCTATCCAACCAAGTACTTTGGTTGCGAGCTGGGCGCC
CAGACGCTGTTCGATCACAAGAATGAGCGCTTTGTTGTGAATGGATCGCA
TGATGTGAACAAGTTGCAGGATTTGTTGGATGGTTTTATTCGCAAGTTTG
TGTTATGCCCCGAGTGCGACAATCCGGAGACCAATTTAACTGTGTCGGCC
AAAAACCAGACCATTTCGCAGTCTTGCAAGGCATGCGGCTTCCATGGTCT
GCTCAAGGTTAACCATAAAGTGAACACATTCATTGTGAAGAACCCCCCGT
CATTGAATCCGGCCGCCCAAGGATCATCGCTAACCGAGGGCAAACGCTCG
AGGAAACAGAAGCAGAAGAACGATAACGCCGATGGCTCCATGACCAATAA
CTCTTTGGCCAACAACTCTGGCGGTGAATCAGATGGCGGCAACGGCACAA
ATCAGGCTAGCCAAACTGAGGCCGAGATTAGCGCAGCTATTCCGGAGAAA
ACAGCCAAAGATGACGACGATGAGGGATGGAGTGTCGATGTTTCGAAAGA
GGCTATTCGTGCTCGTTTGCAAGATCTGACTGATGGTGCTAAGGTATGAC
TATTTCGGATGACTATGATAAAACTGAAAAGGAGCGCATTGATATTTTCT
ACGAGTTGGTTAACGACAAGCGGGACAGAGCAATTGGATGATGTGCAAAC
TCACAGAGCTGTGATGAGCCGACGCTGATATATACAGCTCCATGTCTCGC
CGAGCTGCTTTCACTGAAACATCATCAGACGTGCAGAGATCGCCTTTGCT
CCTCGCCTCACCCTCATAATCAAGCAAGCGCTATCTATTGGTGGAGTGGA
CAACTTAAGCTGCTAAGTAATTGATGAGACAGGTGCTGACTCTCATTGTT
TAGACGACATCTCAGAGCCCTCTACTGGATGCCAAAGTCCACGATCGTTC
CGAATGTCGCGTGTCAAATCCGAGAGGCGATGTC
UFO01750.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:14:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| eIF5-RF | 2383 | CG9177-RF | 870..1894 | 9..1000 | 4305 | 96.3 | Plus |
| eIF5-RG | 2521 | CG9177-RG | 1008..2032 | 9..1000 | 4305 | 96.3 | Plus |
| eIF5-RB | 2588 | CG9177-RB | 1075..2099 | 9..1000 | 4305 | 96.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:14:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 15988069..15988546 | 697..220 | 2375 | 99.8 | Minus |
| X | 23542271 | X | 15988617..15988829 | 221..9 | 1065 | 100 | Minus |
| X | 23542271 | X | 15987830..15987989 | 855..699 | 655 | 96.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:14:35 has no hits.
UFO01750.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:08:34 Download gff for
UFO01750.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| eIF5-RA | 1012..1987 | 1..950 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:22:31 Download gff for
UFO01750.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| eIF5-RB | 1067..2042 | 1..950 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:10:20 Download gff for
UFO01750.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| eIF5-RB | 1067..2042 | 1..950 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:10:20 Download gff for
UFO01750.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 15987758..15987989 | 699..911 | 91 | <- | Minus |
| X | 15988068..15988544 | 222..698 | 99 | <- | Minus |
| X | 15988617..15988835 | 1..221 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:22:31 Download gff for
UFO01750.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 15881791..15882022 | 699..911 | 91 | <- | Minus |
| arm_X | 15882101..15882577 | 222..698 | 99 | <- | Minus |
| arm_X | 15882650..15882868 | 1..221 | 98 | | Minus |
