UFO01752.5prime Sequence
1161 bp (1019 high quality bases) assembled on 2008-10-27
> UFO01752.5prime
CAGTCGACATGAACTTTGCACGCCTGAGATTCGGGCAGATGGTCCTTGGA
GGACTTCGAATTCCGCGCCAGCAGACGCAGACGCAGTGGATGATGGACCG
CCGCCGATGGTTGGCCAGTGAAGCCACCTCATCGGCTGCGGCGCCAGCTC
AAGCAGCTTCTGTACCTAGAACTCAAACGCAACCGCGGGTAAAGCCATTG
CCGCTAGCCGAGGAGCGCTTGGAGTCGATACTATCGCCCATTCGCACCAG
GATCATTCGAAAGAAGCGCTTGGCCATCGATGAACTGTCCGCTTTGGGGT
TTCTCAACACCCGTGGTTATACGACCGCCGAGGAGTACAATCTGGAGGAT
CTGCAGATAGCCCTCCGCGAGCAGAACCTGTACGAGACGAAGCGTTTCTT
CTCCACAGACAATCTGGACGTGGAGCAGAATGTGCTCTTTGTGGCGGCCA
AATATCCGACGGGTCAGCAGCCGCGGGAGATATTCTTCTTCCGCGAGGGC
TCGGTGGTCTTTTGGAACTTCAGCGACATCGAGACGAACAATGTGCTAAG
TTTCCTGCGCGCCTTCGAAAGGGAATCGTATGTGAGTGCCCTGGTTCACG
GGGAGAGCGAGGTGATGCCCTACACCTACATTCCATCGACGGCGGTGGAT
GTGGAGGGCGATCTGGTGGCGGAGAGCAGCGACTTCAATGTCACGTCACG
GGCATTCTTCCAGAATGGCAAGTTCTTTGTTACCGCCGATACGGATAGTT
TCCTGTACAAGTACACCTTCTCCAATGCGATGGCACAGTCAATAAAGCTG
GGCATGTGGGAGGCGACACTGGACCGCTACATAGACTCCATAGAGCATCT
CACCGAGGATCTAAAGCGTGGTCGCCGATTGAGATCTCGCGGGCGGCCAT
GCTGCGAAAACCGTGATTATTTGCCCTGCGTCATGTGATCACCTGTCGTC
GGATCTGCTGATGCACCCGAATTCTACTGGGACCGCGAGAACTGGAGCAC
TCTACTGCAGGTGTGCTCTACTTTCAGCATCTCCGGGCCACCAGTGATGA
CGAAGTTCACCACTGCTGAACTGGCGAGCTGGGTTCCACATCTGACAGCA
TCATCGCAAGTGAAGACTTATCGATCTGATGCTCGAAGGTGCTCTCGATC
GATGCTAGCTA
UFO01752.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:42:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11679-RA | 1462 | CG11679-RA | 128..1236 | 8..1095 | 4860 | 97.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:42:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 15737793..15738827 | 1033..8 | 4615 | 98 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:42:09 has no hits.
UFO01752.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:08:32 Download gff for
UFO01752.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11679-RA | 76..1128 | 1..1043 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:36:07 Download gff for
UFO01752.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11679-RA | 121..1173 | 1..1043 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:26:12 Download gff for
UFO01752.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11679-RA | 121..1173 | 1..1043 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:26:12 Download gff for
UFO01752.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 15737782..15738830 | 1..1043 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:36:07 Download gff for
UFO01752.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 15631815..15632863 | 1..1043 | 97 | | Minus |
