UFO01759.5prime Sequence
633 bp (402 high quality bases) assembled on 2008-10-27
> UFO01759.5prime
CAGTCGACATGCGCCCTCGATTTGTATGCCATCAGCAGCACTCGGTGGCC
CATTCCCACTACCAGCCCCACTCCCACTTCCATCACCATACCCACCGCCC
ATCCCAATCCGCCCCATCACCATCACATTTACGGCGCCACTGACGTCAGT
TATCGGCGTTATCGCACCGCTGGCATGGTGGTGGCCGAGGGAGTTATGGA
CTCCGGGTCGGGATCGGGCACGGGAACGGGCTTGGGGCACTTCAACGAGA
CCCCATTATCCGCACTGGGCATCGAGACCCGCACCCAGCTGTCCCGCATG
CTGAACCGCAAGAAGGTGCTGCGATCCGAGGAGGGCTACCAGCGGGACTG
GCGCGGCATCTCGGAGCTGGCCAAGCAGAAGGGATTCGTCGACGAGAACG
CCAACAATCCCATGGATCTGGTGCTGATCAGCTGGAGCCCAGCGGAGTCC
CCAGACCGCCAAGGTGGGCATCTGAAAACTTCCGGGGGATTTTCGATCGG
TGGGACCTCTGCGACGATATCACGGAAATCTTGGGCAGACACACAGGTTC
TTCTTGAACAGGACAGCGACGACGGTCCCGTGAAGGCTGTCGCGCCCCAG
CGATGTTGGGACCACACACTAGAGGAGAAACAT
UFO01759.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:42:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Myd88-RC | 2424 | CG2078-RC | 595..1107 | 9..521 | 2400 | 98.3 | Plus |
Myd88-RB | 3613 | CG2078-RB | 929..1441 | 9..521 | 2400 | 98.3 | Plus |
Myd88-RA | 2758 | CG2078-RA | 929..1441 | 9..521 | 2400 | 98.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:42:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 9307282..9307794 | 521..9 | 2300 | 98.3 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:42:15 has no hits.
UFO01759.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:08:38 Download gff for
UFO01759.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Myd88-RA | 874..1411 | 1..537 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:36:09 Download gff for
UFO01759.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Myd88-RA | 920..1457 | 1..537 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:26:18 Download gff for
UFO01759.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Myd88-RA | 920..1457 | 1..537 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:26:18 Download gff for
UFO01759.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 9307265..9307801 | 1..538 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:36:09 Download gff for
UFO01759.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 5194770..5195306 | 1..538 | 96 | | Minus |