UFO01761.5prime Sequence
1125 bp (960 high quality bases) assembled on 2008-10-27
> UFO01761.5prime
CAGTCGACATGAGTTCAGACGAGTCCAGCGACGGTTTGGAGGAGCTGCAG
AGTCTGAAGGCCCTCTACGGCCAGCAGGAGCAAGAGAAACCGGCAAAGAT
CAAAAGGGAACGTTATATTCCAAAGGCCTCGCAGGCCAAGGAGCTCAACT
ATGTGGAGGTGCCCATGGAAAAGGTGCTCTTCGGCGACAGGCAGCGACTG
CTCACCAATCTAGCCAAGTCCGTGGGACAAAAGTTGCCGAACGATGACGA
AGACGAGCAGGAGGAAAATCCCGGCCAGGCAAAGCCAGGCGACAAGCGGA
AAGCCGCCTGGTCGGATTCCGATGACGAGGACCTGCAGGTGGGCGATGTC
AAGAAGGCCACAAAGCACACGGGTCCACTGAACCACCTGCGCAAGGATAA
ATCGTACAAGGAGTATCTTACGGCGCGATTCCAGCGCACGCTTAACCAAC
CCAAGTGGGCGGAAAAGAAGGTCAAAAATGAGGACGACGAGGACGTATCC
TCCGACGAAGAACTGCTGCGGACGGTTGGCTTTATCGATCGTAAAGCCCG
GAACAGTGATCTGCCCCAGAAGACTCTGAATTTTAAACGGGTCAAAGACC
TGAACAGGGCCACATATGCCGAGGGTAATGCCACCAGCATTCAGTTTCAT
CCAACCAGTACTGCTGCTCTAGTGGCGGGCATGAATGGCCTAGCCACCAT
CTACGCCGTGGATGGGCAAAAGAACGAAAGGTTGCACAACATGCGCTTCA
AGAAGTTCCCGCTGGCGTGCTCCAGATTTGCTCCATGCGGCACAAGGGCG
TTCTTTGGTTCTGTGAAACCATTCTACTACTCCTACGACTTGCTGGAAGC
CAAGGAATCGAAGCTAAAGCTGCCGGGCGCAATGGAATTTATGCACGCTT
TGAGTGTCTCATGTGCAAATTTATCGTCACTGCTGGCAGTTTGGAGCATT
CACCTGCTCACGACAAACAAATGACTGCTGCACAGCTTCAGCAGGAGCAG
TGATGATCAATGGTCTATGACTCAGAGGATCTCGTCTGCGTCACTTCCAA
TTCACTGCTGACCTGGGCGTGACTTCGGCATTTCTAGGACACGCGTTAAC
TTGGAAGTCAATTCACCGTGTCTTC
UFO01761.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:32:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| wcd-RA | 1663 | CG7989-RA | 106..1173 | 9..1051 | 4730 | 97.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:32:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 16346405..16347395 | 990..9 | 4510 | 98.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:32:36 has no hits.
UFO01761.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:08:21 Download gff for
UFO01761.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| l(2)k07824-RA | 100..1102 | 1..997 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:05:51 Download gff for
UFO01761.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| wcd-RA | 102..1104 | 1..997 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:05:29 Download gff for
UFO01761.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| wcd-RA | 102..1104 | 1..997 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:05:29 Download gff for
UFO01761.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 16346405..16347399 | 1..990 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:05:51 Download gff for
UFO01761.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 12233910..12234904 | 1..990 | 98 | | Minus |
