UFO01765.5prime Sequence
1196 bp (989 high quality bases) assembled on 2008-10-27
> UFO01765.5prime
CAGTCGACATGACGCAAATGTCGCAGGACGAAATCATAACCAATACGAAA
ACAGTCCTTCAAGGCCTCGAAGCCTTGCGAGTGGAGCATGTTTCGATTAT
GAACGGAATCGCCGAGGTGCAGAAGGACAATGAAAAGTCGGACATGCTGC
GAAAGAACATCGAGAACATCGAACTGGGCCTCAGCGAGGCCCAGGTGATG
ATGGCCCTGACATCCCATCTGCAGAACATCGAGGCCGAGAAGCACAAGCT
TAAGACACAGGTGCGCCGCCTCCACCAGGAGAACGCCTGGCTTCGCGACG
AGCTGGCCAACACTCAGCAAAAGTTCCAGGCATCCGAGCAGCTGGTGGCC
CAACTAGAGGAGGAGAAGAAGCACCTGGAGTTCATGGCGTCCGTGAAGAA
GTACGACGAGAATCAGGAGCAGGACGACGCTTGCGACAAGTCCCGCACCG
ATCCCGTGGTCGAGCTATTCCCGGACGAGGAAAACGAGGACAGACACAAC
ATGTCGCCCACTCCGCCCAGCCAGTTCGCCAACCAGACTTCCGGCTACGA
GATTCCAGCGCGTCTCCGTACTCTGCACAACCTGGTCATTCAGTATGCAT
CGCAGGGAAGATACGAGGTAGCCGTTCCCCTCTGCAAGCAAGCATTGGAA
GATCTCGAAAGGACAAGTGGTCACGACCATCCCGATGTAGCAACCATGCT
GAACATTTTGGCTCTCGTGTACCGCGATCAGAACAAGTATAAGGAGGCCG
CCAATTTACTCAACGACGCTCTGTCGATTCGAGGAAAGACACTGGGCGAG
AACCATCCAGCCGTGGCGGCCACGTTGAACAACTTGGCCGTCCTCTATGG
CAAACGTGCAAGTACAAAGATGCCGAGCCACTGTGCAAGCGTGCCTTGGA
GATCCGAGAAAAAGTCCTGGAAAGATCATCCCGATGTTGCCAAGCAACTT
AACAATCTCGCCTGCTCTGCAGGATCAGGCCAATACGGACGAGGGTTGAA
AAGTACAACAGCGAGCTCTTCGACATCCTACGATCAAGTGGTCCCGATGT
ATCCAAACTGGCCAGAACAAGAATATCTGCCGCCTTCTACTCTGGAGCCA
GGTAATACCGAACTGATCTCTTATATACCAGGCTGACCGAGCTGAACGGT
AATTGGAACTCGCAGAAAACGGTCATTGCCAAGTGGTCCTGAGGAG
UFO01765.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:27:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Klc-RC | 1876 | CG5433-RC | 156..1260 | 9..1104 | 4860 | 97 | Plus |
Klc-RB | 1841 | CG5433-RB | 118..1222 | 9..1104 | 4860 | 97 | Plus |
Klc-RA | 1843 | CG5433-RA | 120..1224 | 9..1104 | 4860 | 97 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:27:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 12748056..12748657 | 610..9 | 3010 | 100 | Minus |
3L | 28110227 | 3L | 12747521..12747757 | 962..729 | 1040 | 97.9 | Minus |
3L | 28110227 | 3L | 12747821..12747943 | 731..609 | 615 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:27:38 has no hits.
UFO01765.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:08:17 Download gff for
UFO01765.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Klc-RA | 113..1104 | 1..987 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:02:55 Download gff for
UFO01765.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Klc-RA | 113..1104 | 1..987 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:15:10 Download gff for
UFO01765.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Klc-RA | 113..1104 | 1..987 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:15:10 Download gff for
UFO01765.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 12747431..12747754 | 732..1048 | 93 | <- | Minus |
3L | 12747821..12747941 | 611..731 | 100 | <- | Minus |
3L | 12748056..12748664 | 1..610 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:02:55 Download gff for
UFO01765.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 12740531..12740854 | 732..1048 | 93 | <- | Minus |
arm_3L | 12740921..12741041 | 611..731 | 100 | <- | Minus |
arm_3L | 12741156..12741764 | 1..610 | 99 | | Minus |