UFO01769.5prime Sequence
1014 bp (452 high quality bases) assembled on 2008-10-27
> UFO01769.5prime
CAGTCGACATGCGACCCAAGGATCACCCTGATCTGCACTTCGACGTGATT
CCCAAGCTCTACGATGCCCATTCCAAGGTGTTTCTAACCAGCTTGTGCGA
TGTGGATGAGCAGCTGAAACTATTGCCACGCCGATTCTGTCGGATGTACA
CCACTCGGCCACTGGCCACCCAGCTGTTTCAGTATCTGCAATCCCGCAAA
GCGAACGTTTCGGAACAGGACTTCCTTGTGGTGGAGGAGGGCCAGCCCTT
CGCACTGCTTCTGAAAGACGGAAAACGGTTGGAAGGGATGCTATGCTCTG
GAAGTCATCTGGGACACAGCCTCATTCTGCTTATCCGGCGGCAGCAGGGT
AACAGATTGCTGTACTGCTACTCGGGCTATGAGGGCTGGATAAATCTTGG
TCGTCTACTGGGGCAACTTCTGGTCTTCACTTCTTGGATCGGCCCAGGAA
CCCGAACGCTTGTATCTGAACCCGTCCCCTCGGAAATTTTGCCGGTGGGA
CCAAAGGGATGGAAGAGAAGGGAATTTTCTCCGGAACTCCCGAGCAGAAT
GGCCCAGGTTTGGGGACCCGAAAGGCCAAATTTGGGCCCAAAAAAAGGTT
TGGGAAATGGGCCCCCAATTTTTCGGGGGTTTTTTTTTTGGGCCCCCTTT
TGAAAAAACAAAAGGGGCCAAACCCCTGGGGGGGGTTTTTGGGGAAAAAA
TTAAACGGGTTTTTTCCCGGGGGCCCCCAGTTTTTTTAATTAAAAGGGTT
TTTTTTTTTTAAAAAAATAGGGGCACCCCCCCCCAAAGGTTCTTTGCGAA
ATCCTCTTGTCCCCAAAAACCGGGGGGTGTTTTTTTTCAAGGGGGGGGGC
GCCCCCCCCCCTCCAAAAATGAGAGGGGATCACCACAGGGGTCTGTGCGG
TATATTAAAAATGAGGAGGACACGCACTCTCTTCTCTTGCGAGTGTATTT
ATATAAAGAAGAAAGAAATGATTTTTCTCTTCTTGCTGTGGGCGCGGGGG
TATATATATTATCA
UFO01769.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:33:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7341-RB | 1455 | CG7341-RB | 269..741 | 9..489 | 2025 | 96.1 | Plus |
| CG7341-RA | 1436 | CG7341-RA | 250..722 | 9..489 | 2025 | 96.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:33:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 18119817..18120217 | 9..412 | 1870 | 99.3 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:33:45 has no hits.
UFO01769.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:08:12 Download gff for
UFO01769.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7341-RB | 256..702 | 1..455 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:33:45 Download gff for
UFO01769.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7341-RA | 243..689 | 1..455 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:07:32 Download gff for
UFO01769.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7341-RA | 243..689 | 1..455 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:07:32 Download gff for
UFO01769.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 18119810..18120217 | 1..412 | 98 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:33:45 Download gff for
UFO01769.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 18112910..18113317 | 1..412 | 98 | == | Plus |
