UFO01775.5prime Sequence
1169 bp (979 high quality bases) assembled on 2008-10-27
> UFO01775.5prime
CAGTCGACATGGCCGGCTTCGTCGCGGTGCACACGGGGGCTGGGAACTGC
ATCGACGAGACGAAGTACCAGCGGGTGATTAAGGAGGCCTGCCTGCGCGC
CACGGAGATCCTTCGCAACGGCGGATCCGCCGTCGATGCCTGCGAGGCGG
CCATTGTGCGGCTGGAGAACTGCGGCTACACAAACGCCGGCTATGGCTCC
AATCTCTGCATGGACGGCTCTGTGCAGTGCGATGCGGCTATAATGGATGG
CTCAACGCTTAACTTTGGCGCCTGCACGAACGTTAGTCGGGTGAAGAACC
CCATACAGTTGGCGAGACGCATCTGCGATGCCCAGTCCAGTCCGCAGCTT
CTGGAGCGCATTCCACCGATGATCCTCGCCGGCACTGGAGCGGAACACTA
TGCCGACGAGGTGGGTTGCTCCATGGTGGAGCCCGGCGTACTGATCTCAT
CTAAGGCCAAGTTCCAGTTTAATCACTACAAAAGCAAGTACGACCTCGTG
GTCAACAGCAGATTGGGCAAGGCAACGTCCGAGGAATCCGTACAAGTGCC
GGAACCAGGAAACGAGGTGGAACTTGCCGCTGCTTTGGACACAGTGGGAG
CGGTATGTGTTGATGGGGCAGGGAACACAGCAGCTGGATGTAGCTCCGGT
GGCATACTGCTCAAAGTTCCGGGCAGAGTGGGGCAGGCGGCTACTTATGG
TGCCGGCTGTTGGGCCACCGATACGGACGACTGGCCATAGCCACCTGCAC
AACCGGAAACGGCGAGTACCTGATGAAAACGCTGCTGGCCCGAGAGATCT
GCCATGGGGCATTTAGCAGTGATTGTGCGGTGACCAGTCTTCACAGACGT
TCAAGCAAAAGTTCCTGGACTCCCCGCTGCTGCCCCGACAGCAGGATCTG
TACGCTGGAGCTCTGACGCTACTCTATTATCCGGGCCAGAGCAGCGGCGA
GGTGATGTGGAGCCACCCGACGCAGTCGTTCTGTGGTCGGCTACATGGCA
CACAAGGGGCCAAGTTTGGTGCATTCGCGCTGCCACGTACAGCGGTCCCG
GGCGATCCTCCTCTCAATGCTAATTTCATTGGCCATTGCAGCTTCCGACA
TCGTGGGCGCGGGCCAGTATGGCTAGCTACCTGCTAATCTATCACATGCT
AGGGAATCTGCCTGGACTA
UFO01775.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:34:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Taspase1-RB | 2159 | CG5241-RB | 84..1138 | 7..1053 | 4945 | 98.6 | Plus |
| Taspase1-RA | 1503 | CG5241-RA | 84..1138 | 7..1053 | 4945 | 98.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:34:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 16086372..16087337 | 1000..36 | 4670 | 99.6 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:34:48 has no hits.
UFO01775.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:08:06 Download gff for
UFO01775.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Taspase1-RA | 61..1128 | 1..1057 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:05:06 Download gff for
UFO01775.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Taspase1-RA | 76..1143 | 1..1057 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:18:50 Download gff for
UFO01775.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Taspase1-RA | 76..1143 | 1..1057 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:18:50 Download gff for
UFO01775.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 16086351..16087336 | 37..1014 | 98 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:05:06 Download gff for
UFO01775.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 16079451..16080436 | 37..1014 | 98 | <- | Minus |
