UFO01782.5prime Sequence
1129 bp (62 high quality bases) assembled on 2008-10-27
> UFO01782.5prime
CAATCCACATGGCCACAAGCATCCAGCTGTTGCCCAGTGGCAACTTGTCC
AGCAATGGCAAGACCAAGACAGAGGACGGTGAGGAGGTGGAACCCGTTGT
TGGACCTCGTGCAGCGGGTGCAGATGCCGGACTAGCACTAACGGGACGAC
TAACAGGACACCCATCCACATCCGGAACGTTTATGAAACTGAAAACCTAT
CTCCTACCTCTGCGTCCCTGGTCGCTGTCCGCCAGTCTGGTTCCAACGCT
GCTCGGCTCAGCCCTGGCCTACCGCTCCCAGTGGGCGGAGGAGTTTTCGC
TGGCCACCTTCTTTCTCACCGCCTTCACCGTGGTCACCGTCCACTGCGCC
GGCAACGTAATTAACACCTATTTCGACTTCATCAAGGGCATTGACAAGCA
GAAAGCCGACGACCGCACGCTGGTGGATCACATACTCACCAAGGATGAGG
TGGTATCGCTGGGTGCCATTCTGTACATGGCTGGCTGTGGAGGATTTGTT
TTGCTGGCTGTGCTCAATCCGGCGAAAATGGATCACCTGGCACTGATCTA
CTTCCGGGGATTGTCCTCTAGCTTCCTGTACACCGGAGGCATTGGTTTCA
AGTACATCGCCCTGGGAGATCTGGTTATACTGATACTCTTTGGACCCATC
TCGGTGCTATTGCCTTCATGTCACATACAGGTCATTTGGACTGGACGACA
AGGGGCTATGCAATTCCTTTGGCTCTCAACACAGGTGCCATCCTGCACAG
CACAACACAAGGGATGCGGACAACGATCGCAGGCTGGAATCGTAACGCTC
GCCATTCTGATAGCCCTACAGCATCACACGTACTGTATGCGATGCTGCTC
TTGCACCTACTCATGCTCTCATATGGGTATGAAGTACTCACTGTGGTTCT
GCTGCCGCTGTAAGCATGCCGTAAGCGTTCTCGATGAGAAACTGTCACAC
GAACAATACAATGCATCTGTGCGTAGCCACAGGCAGCTGACTCGTTGTGC
AACTGGACCGTGCTGCGATCGGGCATCAGTGCCACCTGATGCAAAAATGA
CTCGACCATCGATGGGAGCGCGGGCCGGTAAGCTAGACCATGCAACATCA
GTCCAGATCTAGAAATCAGGCTGAACTCG
UFO01782.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:20:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| heix-RA | 3130 | CG5876-RA | 546..1492 | 8..942 | 3895 | 94.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:20:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 16298869..16299313 | 452..8 | 2090 | 98 | Minus |
| 2L | 23513712 | 2L | 16297787..16298195 | 852..448 | 1590 | 94.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:20:03 has no hits.
UFO01782.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:08:10 Download gff for
UFO01782.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| heix-RA | 558..1496 | 1..930 | 94 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:28:52 Download gff for
UFO01782.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| heix-RA | 541..1479 | 1..930 | 94 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:06:48 Download gff for
UFO01782.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| heix-RA | 541..1479 | 1..930 | 94 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:06:48 Download gff for
UFO01782.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 16297702..16298193 | 450..930 | 92 | <- | Minus |
| 2L | 16298872..16299318 | 1..449 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:28:52 Download gff for
UFO01782.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 16298872..16299318 | 1..449 | 97 | | Minus |
| arm_2L | 16297702..16298193 | 450..930 | 92 | <- | Minus |
