UFO01825.5prime Sequence
1123 bp (1013 high quality bases) assembled on 2008-10-31
> UFO01825.5prime
CAGTCGACATGCCGAACGAAAACGCAGAGGACCTCTCGGGTCAAGAGCTA
AAGCAGAAGGCCAAGGAGGTGGCCGACGCATCGGAGGCAATGCTCGAAAA
GGTTGTTGCCGGCTTAAATATCCAGGACACGGCATCGACGAATGCAGCAG
GAAACGAGGATGCGGAGCAGCCTGATGGTGCCAAGAATGAGGCTTCAGTG
TCTGCGAATGCAAGCAAACAGGCCTTGCTACAAGCCGTTTCCGATGCTAT
GGCCAGTACCCGTCAGATGGCCAAGAAGTTTGCATTTTGGTCCACACAGC
CAGTCACCAAGCTGGACGAGCAGGTGACCACCAACGAATGCATTGAACCG
AACAAGGAAATTAGTGAGATTAGAGCATTGCCATACACTCTGCCAGGCGG
CTTCAAATGGGTGACACTAGACCTGAACGACGCCAATGATCTCAAGGAGC
TGTACACGCTGCTCAACGAGAATTATGTGGAGGACGATGATGCCATGTTC
CGTTTCGATTACCAGCCCGAGTTTCTGAAGTGGTCGCTGCAGCCACCTGG
CTGGAAACGCGATTGGCATGTTGGCGTTCGTGTGGAGAAGTCCGGCAAAC
TGGTTGGCTTCATCTCAGCCATTCCCAGCAAGCTAAAGTCGTACGACAAG
GTGCTAAAGGTTGTGGACATCAACTTCCTATGCGTCCACAAGAAGTTGCG
CAGCAAACGGGTGGCTCCAGTCCTGATTCGGGAGATAACGCGTCGCGTCA
ATCTGACGGGGATTTTCCAGGCGGCCTATACAGCTGGAGTTGTGTTGCCC
ACGCCAGTGGCCACCTGTCGCTATTGGCATCGATCGCTCAATCCCAAGAA
GCTGGTAGACGTGCGTTTCTCTCATCTCGCACGTAACATGACCATGCAGC
GGACATGAAGCTGTACAGCTACCCGATCAGCCCAAGACAAGGCTATCGCG
ATCACAGCGAGACATGGACAGGCCACAGCTGCTGGAGACTACTAAGCGCT
TCAGCTGGAGCCGGGGTCAGCAGGAGGAGTTTCGTCATGCTTACCCCAAG
AGATATTGATGCTCTGGTGCCGACGAACGCACATCTGATCTGAATAGCTA
CTATGGGCTGCCACTGTCGTGAT
UFO01825.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:41:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Nmt-RA | 1812 | CG7436-RA | 103..1149 | 9..1038 | 4655 | 97.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:41:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 8176913..8177639 | 938..214 | 3445 | 98.9 | Minus |
| 3L | 28110227 | 3L | 8178122..8178327 | 214..9 | 1030 | 100 | Minus |
Blast to na_te.dros performed 2014-11-28 20:41:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| frogger | 2483 | frogger FROGGER 2483bp | 1542..1575 | 676..643 | 116 | 82.4 | Minus |
UFO01825.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:05:21 Download gff for
UFO01825.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Nmt-RA | 84..1147 | 9..1053 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:35:32 Download gff for
UFO01825.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Nmt-RA | 103..1166 | 9..1053 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:25:42 Download gff for
UFO01825.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Nmt-RA | 103..1166 | 9..1053 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:25:42 Download gff for
UFO01825.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 8176781..8177639 | 214..1053 | 96 | <- | Minus |
| 3L | 8178123..8178327 | 9..213 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:35:32 Download gff for
UFO01825.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 8169881..8170739 | 214..1053 | 96 | <- | Minus |
| arm_3L | 8171223..8171427 | 9..213 | 100 | | Minus |
