UFO01826.5prime Sequence
1140 bp (1023 high quality bases) assembled on 2008-10-31
> UFO01826.5prime
CAGTCGACATGAACGCACTCCGTCACACGATATCCCTGGTATCGCTGGGC
ACCTTTCAACTGGTGCGCCGGACCAGGGGGCCGCACGCCAGAGGCTTTCT
CCTCGGCACGGGATTGGGCCTGGCCAGCTTTTCGGCGGTCACGTACGCAC
ATTCCGCGGAGGCTGTCGACCCAAAGGTCAACGGGGTGCAGATGAACACC
TCGCGGTTCATGGCCGAGCCCATCACCGACTCCAAGGCACTGCTGGGGGA
CAAGGAGAACATGCGTCATCGCATGGAGATCCTGATCATGGAGATCCAGG
CGGAGTTTTGCCGCGCCCTGGAGGCGGAGGAGAACTGTGGCCAGAAGTTC
AAGGTGGACCGGTGGGAGCGGCCTGAGGGCGGAGGCGGCATCACTTGCGT
CCTGCAGGATGGCGATGTGTTCGAGAAGGCAGGCGTCAATATATCCGTGG
TCACCGGTTCGTTGCCCCCGGCTGCAGTACAACAGATGCGGGCTCGCGGC
AAGAATCTGAAGGAGGGCGCCTCGTTGCCGTTCTTTGCCAGCGGTGTGAG
TGCCGTGATCCATCCGAGGAATCCCCATGTCCCCACCATTCACTTCAACT
ATCGTTATTTTGAAGTGGAAACTGCCAAGGGGGAGAAGCAGTGGTGGTTT
GGTGGCGGCACGGATCTGACGCCCTATTACCTCTGCGAGAAGGACGCCTC
CCACTTCCACCAGACGCTGAAGTCCGCCTGCGATGAGCACGATCCCACCT
ACTACCCGCGCTTTAAGAAGTGGTGCGACGACTACTTCCGCATCAAGCAT
CGCAACGAGAGCCGCGGCATTGGCGGAATCTTTTTCGACGACATCGATTC
GCCCAACCAGGAGGCGGCCTTCAACTTTGTGTCAAGCTGCGCCAGGGCCG
TGATTCCCTCCTACGTGCCGCTGGTACGAAAGCACAAAAATCGGGAGTAT
GGCACACGACGACAGTGCATGCTGCGCGCGGGCGCTACGTGAGTTCATTT
GATCTACGATCGTGCACAGTCGTCTATACACGCCTGGAGCCCGGTACGAG
AGCATCTGATGTTCCCTGCCTGCACGCCCCTGGGAGTCTGCCGAGCCCAG
TCCCAGTCGAGGAGGCAACTGATAGTCTGACACTCAGATG
UFO01826.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:13:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Coprox-RB | 1467 | CG3433-RB | 99..1227 | 9..1115 | 5080 | 97.9 | Plus |
| Coprox-RA | 1392 | CG3433-RA | 99..1227 | 9..1115 | 5080 | 97.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:13:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 6964519..6965464 | 9..954 | 4730 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:13:13 has no hits.
UFO01826.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:05:19 Download gff for
UFO01826.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Coprox-RA | 90..1195 | 1..1091 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:22:08 Download gff for
UFO01826.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Coprox-RA | 95..1200 | 1..1091 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:09:43 Download gff for
UFO01826.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Coprox-RA | 95..1200 | 1..1091 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:09:43 Download gff for
UFO01826.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 6964515..6965620 | 1..1091 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:22:08 Download gff for
UFO01826.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 6964515..6965620 | 1..1091 | 97 | | Plus |
