UFO01840.5prime Sequence
1130 bp (1022 high quality bases) assembled on 2008-10-31
> UFO01840.5prime
CAGTCGACATGTCGAAATCCAATCTCGTTATCTCGTGCCTTCTGCTGGTG
GCCATCAGCAACAGCCTGGTCCGGGCTCAGGATCTGAAAGTGGAGGTGAT
CAGCACGCCGGAGGTGTGCGAACAAAAGTCCAAGAACGGCGATTCCCTCA
CCATGCACTACACTGGAACTCTGCAGGCCGATGGCAAGAAATTCGACTCG
AGCTTCGACCGCGACCAGCCCTTCACATTCCAATTGGGCGCCGGCCAGGT
GATTAAGGGTTGGGATCAGGGTCTGCTCAACATGTGCGTGGGTGAGAAGC
GCAAGCTGACCATTCCTCCCCAGCTGGGCTATGGTGACCAGGGTGCCGGC
AACGTGATACCGCCCAAGGCCACCCTCCTCTTCGATGTGGAGCTGATCAA
CATCGGCAATGCCCCGCCCACCACCAATGTGTTCAAGGAGATCGACGATA
ATGCCGACAAGCAGCTGAGTCGCGAAGAGGTCAGCGAGTATCTAAAGAAG
CAGATGACCGCCGTGGAGGGACAGGATTCCGAGGAGCTGAAGAACATGCT
GGCTGAGAACGACAAGCTGGTGGAGGAGATCTTTCAGCACGAGGATAAGG
ATAAGAACGGTTTCATCTCGCACGATGAGTTCTCGGGACCCAAACACGAC
GAGCTGGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAG
TGGTCATAATCATAATCATAATCATAATCATAATCACAACTAGCCTAGGA
GATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGG
CGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTAC
TGGATCTATCAACAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCCCG
CCCTGCCACTCATCGCAGTACTGTTGTAATTCATTAGCATTCTGCCGACA
TGCAGCCATCACAAACGGCATGATGACCTGATCGCAGCGCATCAGCACCT
TGTCGCTTGCGTATATATTTGCCATGTGAACGGGGGCGAAGAAGTGTCCA
ATTGCCACGTTTAATCAACTGTAACTCACCAAGATGCTGAAACGAAAACA
TTTCCCAATACTAGAATGGCAGGTTCACGT
UFO01840.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:19:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Fkbp14-RF | 1350 | CG9847-RF | 200..848 | 8..656 | 3245 | 100 | Plus |
Fkbp14-RE | 1294 | CG9847-RE | 144..792 | 8..656 | 3245 | 100 | Plus |
Fkbp14-RC | 1301 | CG9847-RC | 151..799 | 8..656 | 3245 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:19:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 21495131..21495325 | 202..8 | 975 | 100 | Minus |
2R | 25286936 | 2R | 21488017..21488207 | 481..291 | 955 | 100 | Minus |
2R | 25286936 | 2R | 21487669..21487847 | 656..478 | 895 | 100 | Minus |
2R | 25286936 | 2R | 21488271..21488363 | 293..201 | 465 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:19:06 has no hits.
UFO01840.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:05:08 Download gff for
UFO01840.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Fkbp13-RC | 144..796 | 1..656 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:00:18 Download gff for
UFO01840.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Fkbp14-RC | 147..799 | 1..656 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:11:07 Download gff for
UFO01840.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Fkbp14-RC | 147..799 | 1..656 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:11:07 Download gff for
UFO01840.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 21488019..21488206 | 292..479 | 100 | <- | Minus |
2R | 21488273..21488361 | 203..291 | 100 | <- | Minus |
2R | 21495131..21495329 | 1..202 | 98 | | Minus |
2R | 21487669..21487845 | 480..656 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:00:18 Download gff for
UFO01840.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 17375174..17375350 | 480..656 | 100 | <- | Minus |
arm_2R | 17375524..17375711 | 292..479 | 100 | <- | Minus |
arm_2R | 17375778..17375866 | 203..291 | 100 | <- | Minus |
arm_2R | 17382636..17382834 | 1..202 | 98 | | Minus |