UFO01841.5prime Sequence
1113 bp (994 high quality bases) assembled on 2008-10-31
> UFO01841.5prime
CAGTCGACATGGAACGCCGCTACCTGAAGAATCCCTTTCCCGATTTCGCC
GGCGGGGAGAATACACCTTTCGCCAGCGACGAGGAGCACATCAAAAATCT
GATTTGCACCTATGTGGACGCCATACTGGAGCACTGTCATCCGAACAGCG
ATGATGAGGACAATCGCGGTGATCTGTATGTGGGCAATGCCGGCATAGCC
TTCATGTTCTGGAAGCTCAACAGCTGCGAGCAGACACGCGATCTCTATCC
GGCACTGGATCACGCGGCCTCCTTCATCCGCAATGCCAAGGTGAATGCCA
ATCGGTACAAGAAGCGCTCCGCCGAGCGCTACTCCTTTCTGTGCGGCAAT
GCTGGTATCTATGCCGTCTCGGCAGCCATATCGCAGGCGCTCAAGGAGAC
CGAGGAGCTTTCCGACGACTTGGCCAACTTCAAGTCGGGCATCCCGTGCA
GCAAGGAGTTCATGCACACCAAATACGGCTGCGATGAGGTGCTGGTTGGA
CGTGCCGGCTATCTATCCGGTTGCTATTGGCTAAACGATGTACTGCCGGA
GAAGAAGATCACCGACGATGACCTGGTATCCATATGCCAGCTAATCGTGA
CCAGCGGCCGCGAGTACAGCAAGCAGAACAACTCGCCGTGTCCGCTAATG
TACCAATACCATGGCACGGAGTACCTGGGTGCGGCCCATGGCCTGTGCGC
CATTCTGCACATGCTGTTGGACAGCCCGTGGTTCCGCACGCTTCCCATTT
CGGCGCCGGCCGCCGAGTTGCGCGACATCAAGCGCTCGATTGACTTCTTT
CTGGAGCTGCAGGACAGCGATGGCAACTTTCCGGTGGCCCTGGAGGATCT
GCGCTCCGGCAGGGATAAGCGTCTGGTGCACTGGTGCCATGGGGCACCCG
GCGCCGTTTATGTGCTGGCAAGCTATCTGATCTTCAAGGAGAAAGTACTT
GGCCTCGCTGCGTCGCTGTGCGGATATGGTGGGGAAGAAGGCTTCTGCGC
AAGGACGGGCATCTGCATGGCGTCGCCGCATGCTATGTCTTCCTGCCTCT
GTTCCGCCTGACACGAAATGAGTACTGTTACAGGCGCCCAAGTTATGGAC
TGCTAACCAATGC
UFO01841.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:34:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2061-RD | 2182 | CG2061-RD | 279..1403 | 8..1113 | 5050 | 97.7 | Plus |
| CG2061-RB | 2052 | CG2061-RB | 436..1560 | 8..1113 | 5050 | 97.7 | Plus |
| CG2061-RA | 1990 | CG2061-RA | 374..1498 | 8..1113 | 5050 | 97.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:34:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 11093044..11094111 | 8..1062 | 4755 | 97.7 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:34:46 has no hits.
UFO01841.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:05:06 Download gff for
UFO01841.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2061-RB | 191..1323 | 1..1113 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:47:31 Download gff for
UFO01841.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2061-RA | 366..1498 | 1..1113 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:06:07 Download gff for
UFO01841.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2061-RA | 366..1498 | 1..1113 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:06:07 Download gff for
UFO01841.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 11093036..11094168 | 1..1113 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:47:31 Download gff for
UFO01841.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 10987069..10988201 | 1..1113 | 97 | | Plus |
