UFO01845.5prime Sequence
1148 bp (1026 high quality bases) assembled on 2008-10-31
> UFO01845.5prime
CAGTCGACATGGTTAAGGGCAAGAAACCGTACATTGACCGCAAGAAGGCG
GTCACCTTCCATTTGGTGCACCGCAGTCAACACGATCCCCTGGTGACCGA
TGAAAATGCTCCACAGAGGGTGCTCCTCGAGGCAGCGGCGCGCCAGCAAA
AGCCGAAGGATCCAGAGCCACCCACCGATCCCGCCCAACGGCAGGAGGAG
CTGAAGAAGTTTGGTATTCACTTCGACGATGACTATGATTACATGCAGCA
TCTGAAGAAACGTGAAAACGACGTGGTTTGGGAGTTCATGGAGAATCCCA
ATCAAGCGAGAAAGCAGAAAGTCCAGGATAGTGAGAAACCGGGCCCTGCG
CCCAAGCTTATGCTGCCCAGCTCGGTGTTCGCTAGCGAGTTTGAGGAATC
CGAGGGCATGCTAAACAAGGCGGCTCCTCAAACCTTGCGTCTCGACTGGG
ATCCCGATGTGGTCGCCGCCCTGGACAGCGATTGTGAGAACGAAGAGCTG
GAAGATGACTTCGTAATCCAGGCCATGGCCGAGGGCGACTCCGACGACGA
GGAATGGGATGACGAAGATGGGGAGGAGCAATCTGACATGGACTTCGATT
CCGATGACCTAAACGAGGATGAAAATGAGGACGAACTAATGGACCGTTTG
GCACCCCTGATGCGCGAACGTCGCTTTGACGACGAAGAGGTCAAGTCGCG
CTTCACCGAGTACTCCATGTCCTCCAGCGTAATTCGGCGCAATGAGCAGC
TGTCCCTATTGGACGATCGCTTCGAGAAGTTTTACGCCACATACGATGAT
CCGGAACTGGGCGACTTGGCTCTCGAGGACATCGAGGGCAACTGGCACCA
GAAACATCCCGTTGTGATGCAGTGCTTCCAGGAGTTCAAGAAAAAGGACA
AGGCATCGAGTATAACAAGGGTGGGATCGCGAGCGTATCGAAAGTACCGA
AATGTGTCGAGGGTGAGGAAGATCCCACAGAGGAGTTGGTGGAATATGAG
TCGACGACCCTAAGCAGAAGGAGTGGGACTGCTAGTCTATCCTGTCCACT
ACTCGAATATCTACAATCACCCGAAGGTGATCGACGAAGCCGCGACGCAA
TCGTCCCTCAAGGCAGCACAAATCCAGCTCCAATTCCAATCGACTGAA
UFO01845.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:39:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7686-RB | 2099 | CG7686-RB | 79..1221 | 9..1144 | 5375 | 98.5 | Plus |
| CG7686-RA | 1660 | CG7686-RA | 79..1221 | 9..1144 | 5375 | 98.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:39:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 10837448..10838588 | 1144..11 | 5160 | 98.4 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:39:47 has no hits.
UFO01845.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:05:01 Download gff for
UFO01845.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7686-RA | 73..1220 | 1..1146 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:35:06 Download gff for
UFO01845.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7686-RA | 74..1226 | 1..1148 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:37:07 Download gff for
UFO01845.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7686-RA | 74..1226 | 1..1148 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:37:07 Download gff for
UFO01845.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 10837443..10838595 | 1..1148 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:35:06 Download gff for
UFO01845.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 6724948..6726100 | 1..1148 | 98 | | Minus |
