UFO01847.5prime Sequence
1108 bp (1007 high quality bases) assembled on 2008-10-31
> UFO01847.5prime
CAGTCGACATGTTTGTTCCCGAAACGGAGGATATGCTGCCCAGACTAGCG
CCCAGGCCGAGTGCAGCAGTGCCCATGGGCCACACCAATGAGATTATAGG
GCCCACCGTGCCGGAGGTATCCATATTGTTTGGCCAGCCGCCGCAGGATC
CGCAGATGCAGCCGCAGCAGCCAAATCATGCACATCAGGAGTCATCCCCT
CGTGCTGCACCCACCTTCGCGTCCTGGAAGAAGCAAATGCTGCCCAGGGT
CAACTTTTCGCCCATTTTGGCCACAGAACTGGGTCCTCGCACCGCTCCCA
GCAGCAATAGTCCGTGCTCCTCGAAGGAATACCAAGTAATGCCCCGGGAT
CGCAACTATGCAAGCGATGCGCAGCAGACTACCAATCATATGAACTGCAA
TGCTGGTGGCTATAATGCCGAGCCCAAGCAACAGGCATATCAATCTAGGC
GCTTGTCCAGCTCCTCCAACGCAGATGTCCTCACCATCTGTGCTGGCACA
CAGACCGATCCCTTCAACCCATCTCCTCCGCGAAAATCACTGCCCCAGGT
TGTCTATTCCGACATCGACGTCAGCAACTTGGCCAATAAGAGTGATCTGG
CGGCTCTGGTATCCCTTGTGGAGTCCGTGCGCCATGAGCAGCAACAGCTT
CGGAATCTCTGCGAGATGATTTTGGAGCAACAGCAGCGAGCGAAACCCGA
AGCCATTTCAAAAGCCAGCAGTACCACTGGCACCCAGTGCGATATTCTGA
CCACCAATCAAGCAGGTAGACGCTTGTCTCCCATTATGCAGGATTACATA
GCAGAGGAGGAGGAACCATTGCCGCCGCCACAAGCACGAGTGATTCCTCA
GTTTCCGTCTCCTCGACCACATCCGCCGATCGCCCAATCTACGGGCTACC
GGGCCAATACGCTCAGCGAAGCGGATCCCTCAACTGGCAAGCCCAACACG
AGAGAGCATGGTGATGACGAGCTGGCGCTGAAATACTGCGCAGCAGTGAT
GAGTGATGAGATATGCGCTGGGGGCGTCGCGGAGTCCTATCGAGCCACTG
CGTCGATCGACAAATAGCCACGCGCAGGTCAACGAATTTCCAATGCTCGT
ACAGATAT
UFO01847.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:34:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| ana2-RA | 1432 | CG8262-RA | 92..1214 | 9..1103 | 4925 | 97.3 | Plus |
| ana2-RB | 1429 | CG8262-RB | 92..1211 | 9..1103 | 4870 | 97.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:34:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 8899367..8900120 | 762..9 | 3770 | 100 | Minus |
| 2R | 25286936 | 2R | 8899085..8899317 | 987..761 | 865 | 97.4 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:34:50 has no hits.
UFO01847.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:05:12 Download gff for
UFO01847.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ana2-RA | 74..1184 | 1..1085 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:47:33 Download gff for
UFO01847.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ana2-RA | 84..1194 | 1..1085 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:06:10 Download gff for
UFO01847.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ana2-RA | 84..1194 | 1..1085 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:06:10 Download gff for
UFO01847.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 8898967..8899315 | 763..1085 | 92 | <- | Minus |
| 2R | 8899367..8900126 | 1..762 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:47:33 Download gff for
UFO01847.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 4786472..4786820 | 763..1085 | 92 | <- | Minus |
| arm_2R | 4786872..4787631 | 1..762 | 99 | | Minus |
