UFO01865.5prime Sequence
1125 bp (1019 high quality bases) assembled on 2008-10-31
> UFO01865.5prime
CAGTCGACATGCAGGCCATCAAGTGTGTGGTTGTGGGCGACGGAGCGGTG
GGAAAGACCTGCCTGCTGATCAGCTATACGACCAACGCCTTCCCCGGCGA
GTACATACCCACGGTGTTCGACAACTATTCGGCGAATGTGATGGTGGATG
CCAAGCCCATCAATCTGGGCCTCTGGGATACGGCTGGACAGGAGGACTAC
GATCGCCTGAGGCCGCTATCCTATCCGCAAACGGATGTCTTTCTCATCTG
TTTCTCACTGGTGAATCCGGCATCGTTTGAGAATGTGCGAGCCAAATGGT
TTCCCGAGGTGCGTCATCATTGCCCGAGTGTGCCGATAATCCTGGTCGGC
ACCAAACTGGATCTGCGCGACGATAAGCAGACGATCGAGAAGCTGAAGGA
CAAGAAGCTAACACCGATCACCTATCCCCAGGGACTGGCGATGGCCAAGG
AAATAGCTGCGGTCAAGTATCTGGAGTGCTCGGCCCTGACCCAAAAGGGT
CTGAAGACGGTCTTCGACGAGGCCATACGATCCGTGCTATGTCCTGTCGT
TCGAGGACCCAAGCGGCACAAGTGCGCCCTGCTCGCAAGCTTTCTAGACC
ATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAAT
CATAATCATAATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCT
TGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACA
AATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCA
AGCGAGCTCGATATCAAATTACGCCCCGCCCTGCCACTCATCGCAGTACT
GTTGTAATTCATTAAGCATTCTGCCGACATGGAAGCCATCACAAACGGCA
TGATGAACCTGATCGCCAGCGGCATCAGCACCTTGTCGCCTTGCGTATAT
ATTTGCCCATGTGAAACGGGGCGAAGAAGTTGTCCATATGCCACGTTTAA
TCAAACTGTGAAACTCACCCAGGATGCTGAAACGAAAAACATATCTCAAT
AAACCCTTTAGAATAGCAGTTTCACGTAACACGCCCCATCTTGCCAATAT
ATGTGTAAAACTGCGAATGCTCTGT
UFO01865.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:13:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Rac2-RB | 2429 | CG8556-RB | 680..1256 | 8..584 | 2855 | 99.7 | Plus |
| Rac2-RA | 1299 | CG8556-RA | 680..1256 | 8..584 | 2855 | 99.7 | Plus |
| Rac1-RB | 1805 | CG2248-RB | 337..855 | 8..526 | 1575 | 86.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:13:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 7433935..7434511 | 584..8 | 2855 | 99.7 | Minus |
| 3L | 28110227 | 3L | 1301829..1302347 | 526..8 | 1575 | 86.9 | Minus |
| X | 23542271 | X | 19697956..19698190 | 7..241 | 485 | 80.4 | Plus |
| 3R | 32079331 | 3R | 27638122..27638186 | 165..229 | 220 | 89.2 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:13:02 has no hits.
UFO01865.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:04:43 Download gff for
UFO01865.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Rac2-RA | 662..1255 | 1..593 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:22:06 Download gff for
UFO01865.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Rac2-RA | 673..1266 | 1..593 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:09:37 Download gff for
UFO01865.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Rac2-RA | 673..1266 | 1..593 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:09:37 Download gff for
UFO01865.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 7433925..7434514 | 1..593 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:22:06 Download gff for
UFO01865.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 7427025..7427614 | 1..593 | 98 | | Minus |
