UFO01866.5prime Sequence
1120 bp (1022 high quality bases) assembled on 2008-10-31
> UFO01866.5prime
CAGTCGACATGAACCAAAATCTCTTGTTTGTATTTTTGCTCTGCGCCGCG
CAGGGCCAGGCGGAACTCTCCGGATTACTAAGTGCCCTCCAGTATTTCGG
GCTCTTCTCAAATTTGACGGTGTATTCCCTGGGAGTTTCGCGGGGCCAGT
GCCATTATAGCTTCGAAACCTTGCTGAAGGAGCGACACACATGTGCCCCG
GATGACGAGCACATCATGCACCTAAACCAGCTGCCTCCGGTTCGAAAGCC
ACCTATTATGATGAAGTGCCTGCAGCGGGATATCGAGAATGAGACAGCAT
CCGAGCCGGAACTGCTGATAATGCGCAGTGCCAAGGATATAGTGAATCTG
CTTAAGCCCATGGGCAATGCCACCAAGCGCCACGAGCCGGGCAACTGTGT
GCTTGTCCATTTCTGCACCGCATCCAGCTTGGAGTGCGCTCGTGTGGCTT
CGATGGTCAACGTGCTGCCCCATTACTTTCCCACGCTACCCATCGCCTAT
GTGGATGCCTATGAGTTTGGTCGTTTCAATGCAGAATTCGGCATCGTTTC
GCTGCCCACACTGATGCTATTCCACCAGGGCAGGCCGCTAATCAAATTCG
AGCCCGGGTGGAAGGACACAAAGAGCAGCTTTGCCAGTTTCATAATGAGT
CACACCAATATGAAGACTGTGAATCCGCAGGCCATTGATCCGATCATCCT
CACTCGCGCAGAGATGGAGCCGCTGTCTAATAAACCCATTGTGCAGACGG
ATTACTATTTGGGCCTGGCTTGGGCCTTTATTCTCGTCTGCCTTGCCAAC
TTCCTGCGTAAGACGGCGCTCTGGAAGCAGCTGGTAGAGATGGTGCAGCG
CATTTGGCGGGAATCCGAGGAGACGCAAATGGAGATGGTGGACGCAAGCT
TTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGTCATATCATAA
TCATAATCATATCATAATCACACTAGCCTAGAGATCCTGTCATGACTAGT
GCTTGATTCTCACCAATAAAAAACGCCCGGCGGCACGAGCGTTCTGAACA
ATCCGATGGGAGTTCTGAGGTCATTACTGATCTATCACGGATCAGCGAGC
TCGAATTCATAGGCCTGCTG
UFO01866.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:31:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8297-RA | 1057 | CG8297-RA | 72..956 | 9..893 | 4410 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:31:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 15934981..15935837 | 37..893 | 4270 | 99.9 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:31:24 has no hits.
UFO01866.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:04:41 Download gff for
UFO01866.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8297-RA | 9..898 | 9..901 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:05:01 Download gff for
UFO01866.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8297-RA | 72..961 | 9..901 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:04:47 Download gff for
UFO01866.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8297-RA | 72..961 | 9..901 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:04:47 Download gff for
UFO01866.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 15934896..15934923 | 9..36 | 100 | -> | Plus |
| 2R | 15934981..15935842 | 37..901 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:05:01 Download gff for
UFO01866.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 11822401..11822428 | 9..36 | 100 | -> | Plus |
| arm_2R | 11822486..11823347 | 37..901 | 99 | == | Plus |
