UFO01889.5prime Sequence
1132 bp (1030 high quality bases) assembled on 2008-10-31
> UFO01889.5prime
CAGTCGACATGAGCCGACAGCAGAATGAGGAGGACACCAACTCGGTGCTA
TTCGATGCCCGCAACGAGTACTACATCGGTAACTTCATGGGCTCGATCAA
CTTCGTGCTGCCGGAGCAGGGTACCGCGGGTCCGGAGCTCCTGTCCTACA
TGTACCTATCTTACTTGGCCATCGATTCCGGGCGCATCGTGGCCTCGGAC
ATCAAGGAGGGAAACTCCACGCCACTGCAGGCCTTGCGTCTGGTGCACGA
AGCCTTTGAGCAGCCTTCGAGGACGGAGGAGCTGCTGGAGAAACTCACGG
ACAAGGTGGCCGGAGAGGAGGATGAGACCAACATCTGGCACCTTGCAACC
GCCATCGTCTACTGCCACGACGGGCAGTTCGAGAACGCACTGAAGATCCT
GCACGGCTCCACCAATCTGGAGTCGATGGCTCTGTCGGTCCAGTGCCTGC
TGCGTCTGCAGCGCGTGGACCTGGCCAAGCAGCTGGTGGCCAAGATGCAG
GAGATCAGCGACGATGCTACGCTGACTCAGCTCGCTCAGGCGTGGGTGGC
CCTCGCCCAGGGAACGGAACAGATGCAGGACGCCTTTCACATCTACCAGG
AGTTCTGTGAAAAGTTCAAGCCAACTCCGGCGCTGCTGAACGGCCAAGCG
GTCGTTCATTTGGGTCTGGAGCGGTACGAGGAGGCAGATTCCGTTCTGCG
TGAATCTCTGCTGAAGAAGCACAACGACTACGACACGCTGATCAATCTGA
TGGTTCATGCCCATCTTACGGGCAAGCCGACAGAGGCGATCACCCGGAAT
CTAGAACAGCTGAGGCAGTTCTATCCCAAGAGCGACTTTGTCACCGATCT
AGACAAGAAGTCAGCGGAGTTCGACCGCCTGTGCCTGCAGTACGACGTCG
AGGGCGGTGAAAACTGCTCGCCGTCGCAAGCTTTCTAGACCATTCGTTTG
GCGCGCGGGCCCAGGTAAGTGTCATATCATAATCATAATCATATCATATC
ACAACTAGCCTAGAGAATCCTGGTCATGACTATGCTGATCCCACCAATAA
AAACGGCCGCCGCAACGGACGTCCTGAACAAATTCAGATGGGAGTTCGAA
GTCATTACTGAATCTATCCACAGGGTCAAGCG
UFO01889.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:13:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| epsilonCOP-RA | 1105 | CG9543-RA | 102..1019 | 9..925 | 4565 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:13:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 6489191..6490108 | 9..925 | 4540 | 99.9 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:13:17 has no hits.
UFO01889.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:05:40 Download gff for
UFO01889.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| epsilonCOP-RA | 100..1017 | 9..925 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:22:10 Download gff for
UFO01889.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| epsilonCOP-RA | 102..1019 | 9..925 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:09:45 Download gff for
UFO01889.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| epsilonCOP-RA | 102..1019 | 9..925 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:09:45 Download gff for
UFO01889.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 6489191..6490108 | 9..925 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:22:10 Download gff for
UFO01889.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 6489191..6490108 | 9..925 | 99 | | Plus |
