UFO01926.5prime Sequence
1106 bp (974 high quality bases) assembled on 2008-11-05
> UFO01926.5prime
CAGTCGACATGGTACATCCAGGTCATCGACAGAGCCGAGGACTTGCTGAC
TCGCAGGCTGGAGATGAGAAGTCTGATCGAGAAATGAACACACACCACCT
GACCACCTCGCGAACCAATCCGCAGTTCTATATATTCAGTCAGCTCTTTG
GTAACGATTTCGACTGGAATAATTGCAATTGGGGGGGCATTCAAAACGTT
ACCTGGAAAGAATTCTGGCAGCGTGAGGGGCATGAGCTGCTCGAGCAAAA
GTGGCACAAGCGGTTTCCCGAATACAAAGATCTTATCGAGGTGGTTTCGT
CGGAGGAGCAAGGCCTTTGGCAGGAACTGTGGGAGAAGCACGCCAGCGAT
TACAGTGAAAAGTTCTGGTATATATTTAGCTGTGCCTTTGAGAACTACCA
ACACGATTTGGCCAAATCATTTGGCCTTGACGTCGCTGAAAACTCAGAAG
ATGTTGAGGAGGACTTGCAGAACCTAAGCCTTACAAATAAGCCAATAAAA
TCGAAACAGCAAAGGGTCACAGAGAAAGAGGAGGACGAATCATACTTGAC
TGCCAACGACGATCCCGAGGATTGTGACGAGGAACAACAGCTGCGCCTTC
TCGGATTGCCAACATCATTTGCGTCGAAGGCAGATATAATTAATTATAGA
AAGGAAAGAAAGACACAGTACGAACTATCTAGCAGCGATAGCGAGGACGA
TCATGATCTGTTGACCATGGAGAACAACGAAAACGACGCTCTGCACGGCG
TTCAGAGCGGTTCTGTTAAAAAGAAAAAACGACGGCAAAGGCAAATAAAA
AAACTCAAGGCCAGGATGCCAGAGTGCATGCAAGAGGATAACAACAAATG
GTCAAGTACTGGGTCAAGCGATTCTCGCTGTTCTCCCGCTTCGATCAGGC
ATTCGGCTGGACCGCGAGAGCTGGTTCTCGGTGACACCCCGAGAGATTGC
CAACAAACGCCCGACGACTGGCCTGCGACGTGATCGTAGATGCTTTCTGT
GGATGCGGCGGCCATGCCATCAGTTGCAACACCTGTGGGACGCCTAATTG
CCGTTGACATCGATGCCGAGAAGTGGCCATGGGCAGCATATGCGGCATTA
TGGTGT
UFO01926.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:19:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Tgs1-RB | 2089 | CG44890-RB | 545..1653 | 9..1106 | 5090 | 98.1 | Plus |
| moi-RA | 2089 | CG42350-RA | 545..1653 | 9..1106 | 5090 | 98.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:19:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 18256133..18257204 | 9..1074 | 4835 | 98.2 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:19:37 has no hits.
UFO01926.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:16:22 Download gff for
UFO01926.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42350-RA | 518..1627 | 1..1099 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:28:38 Download gff for
UFO01926.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Tgs1-RB | 536..1645 | 1..1099 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:06:37 Download gff for
UFO01926.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| moi-RA | 536..1645 | 1..1099 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:06:37 Download gff for
UFO01926.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 18256124..18257233 | 1..1099 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:28:38 Download gff for
UFO01926.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 14081846..14082955 | 1..1099 | 97 | | Plus |
