UFO01974.5prime Sequence
1095 bp (957 high quality bases) assembled on 2008-11-05
> UFO01974.5prime
CAGTCGACATGCTAGCGATGCACAGGTGGATCCTACTGCTGCTGGCCGGA
TTTCTAGCGACTGGTCGGGCGGAGGATCTGCTGGAGTTGTCCTGCAGCTC
GGACGCACAGTGCGCCCAGTTTGAGCGCGGTCGCTGCGTGGACATGGCCT
GCATCTGCACAGCACGTGGCTCCGGCGAACGGGTGCCGTGTACGCCGCTG
GAGGAGCGCCTCAAGCTGACCAACATCATTGGTGGTGCCTGTCCATGTCC
CATGCCGAATGCCATATGCCACACGCGATGGCAGCAGTGCCACTGCTCCG
AGGGTCATGTGTCCAGTGACGACCGCAGACGCTGCCTGCCGGCGGTGGTC
CCGGTGGGCGGAAGCTGTGAGTTTCAGCAACAGTGCCAGCGGGCGGATCG
GTTTAGCTCCTGCATTGGCAACCAGTGCCTCTGCCTTAACCAATTCGAGT
TCCACGAGGGACGTTGTCTTTCTGTTTTGCAATCAAGCTGTCTAGAGGAC
AAGGATTGCGGCAGCTGTGGAGCCTCGATTTGCCTGACAAAGACGAAGCG
GTGCGGCTGCTCCAAAAACTTTGTGCACAACCACAACATGATCAAGTGCA
TCAAGGGCTCCGCTTACGGTGACACGTGCGAGCACAGTTCGCCGTGCAAG
CTAAACCTGGGTGCCGATGGCAGGTGCCTGGATCACCTCTGCGTCTGCCG
TTCGACCCACTACCCCAAAAGGGTAGCCAACGAGGTGGCCAAGGACGAAA
ACGACGATCTCGATGCGGTGAACAATCTGGAGCGGATCACTTGCGCACCC
ATCGTGCCGTTCGGGGCACTCTGTCGAACGATAGCGAATGCCGGATGCAG
CCCATGGACCAGGAGATGCCACAGCATCCATTGGCCATCCCATGGTGTGC
AATTGGGGCGATTGCTCCTGCAATAGACCCATCGACTGGAGACAACAGTG
CGTTTTTGTTGAAGACTCGCAACGGATTATCACTAGAAGCCTTTGTTGGC
CTTCCTTTGGTGTCAGTTCCAATGATTCTTTAGCAAGCTTTCTGAACCAA
TCGTTGGCCGGCGGTCCAGGTTAAGTGACCAATCTAGCCTTAATC
UFO01974.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:45:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11674-RA | 1172 | CG11674-RA | 75..1107 | 7..1032 | 4735 | 97.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:45:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 14225332..14225805 | 480..7 | 2370 | 100 | Minus |
| X | 23542271 | X | 14224712..14225270 | 1032..481 | 2140 | 95.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:45:12 has no hits.
UFO01974.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:15:32 Download gff for
UFO01974.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11674-RA | 75..1112 | 1..1032 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:08:40 Download gff for
UFO01974.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11674-RA | 70..1107 | 1..1032 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:24:52 Download gff for
UFO01974.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11674-RA | 70..1107 | 1..1032 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:24:52 Download gff for
UFO01974.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 14224712..14225270 | 481..1032 | 96 | <- | Minus |
| X | 14225332..14225809 | 1..480 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:08:40 Download gff for
UFO01974.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 14118745..14119303 | 481..1032 | 96 | <- | Minus |
| arm_X | 14119365..14119842 | 1..480 | 99 | | Minus |
