UFO01976.5prime Sequence
1117 bp (1008 high quality bases) assembled on 2008-11-05
> UFO01976.5prime
CAGTCGACATGGACTTTATCGACGACTTCATCGAAGAATACAAAAGCAAT
CCGTGCTTGTGGAAGGCGGACTCGGCGGACTTCAGGAACCGCAGCCGCCG
GCAGGAGGCCTACGCGAAGCTCATCGAGGTGGCCACCAAGCACGGGGAGA
TGTACAATGTGGAGCGAACAAAGCAAAAGATAAACAATCTGCGCTGTGCA
TTTCGTCATCAGCTGAGGAAATACAACGAGGTCAAGAAAAAGGGCGAGAA
GTACGAGCCCTACTGCCCCAAGCGCCGCTACTTCGAGTCCCTGATGTTCC
TTAAGGACGAGGAGATCCCCGCCGACAAGAAGTTCAAGCGCGAGCAGTCG
GTCTGCCTGGACAACTCCATGCAGCTAGGGGCGCCAGAGAACGGCGACGA
GTATTCCGACGCCGAGAGCCTGCACAAGCCCCCAAAGCCGACGGCAGACT
CGATCAAGATGTCACCCAACAACAGCGCCAACGAATTCTGTGCCAACATC
TTCGAGGAGGCCGCCGCCGCCGCTGCCGCTGACCCCGTTATCAGTATTAA
AACAGTCAACAACGCCAACAGCCATGCCAGTGGCGCTACTATCAAGGAGG
TCGAAATCGTGGTGCCTGCTAACAACAGGCTGCTGTCCGCCCGCAGAAAA
TCCGTGCCCGACTCCATAAAGTCTCCGCCTGGCGACTCCGAATCGCCGCA
GTGCAAGCGCATCGTCACCCAGAACCAAACGAAACTGATCAGTAATCAGA
GCCCGAGCCAGAAAGCCAATCACATAACACGGAAAAGGTCCTCCTCGGTC
TCTTCGCAGATTTCGGAGGACAACGAGCCGCCTCCAGGTAAATTCCGAGC
GGACATTTCCACCATTGACTTTGAGCGCCTCTTTTCGCTGGCCCTAAAGA
GTGCGGACAGCCAGCTGGACGACCACTTCTCCAACTTCGGGAAAATTATC
GCACACAGCTTCGCTCCATGGACGAACACAGCTATCTACGCGGAAAAGAT
CATCGCCGATGTGGCTTGTACAGGCCAGATGAAATGCTGTCCTCCCCTGA
CTATACACCAGTTTATGGGCCGTGACATGCACAGTTTACTAGAAGCCAGG
TAGCCAGCTTTCTAGAA
UFO01976.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:03:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3163-RA | 1239 | CG3163-RA | 62..1158 | 9..1098 | 5100 | 98.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:03:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 24029378..24030442 | 9..1070 | 4930 | 98.6 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:03:40 has no hits.
UFO01976.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:15:31 Download gff for
UFO01976.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3163-RA | 58..1148 | 9..1093 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:24:36 Download gff for
UFO01976.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3163-RA | 62..1152 | 9..1093 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:47:44 Download gff for
UFO01976.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3163-RA | 62..1152 | 9..1093 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:47:44 Download gff for
UFO01976.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 24029378..24030468 | 9..1093 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:24:36 Download gff for
UFO01976.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 19916901..19917991 | 9..1093 | 98 | | Plus |
