UFO01977.5prime Sequence
1130 bp (1006 high quality bases) assembled on 2008-11-05
> UFO01977.5prime
CAGTCGACATGCGGAAATACCAGCAACTGGTGCTGCTGCTCATCTCCTGC
CTCAGCGTCAGCATCCTGCTGATGTACAAGACCGAGAACAATCGCCTAAA
GTACGTGCTCAAGTACGTCAACTTCTTCGGACGCAACGATGCCGCTGTCC
TCCGCCGCCTGGAGAACGGAACCAAGGAGGACGGGGCGCAGGTGCTGTGG
CGCCCTCTGCCCGTGTGGCAGGTGATCGGAGACTCCTTTCATGCCTACTC
CGCCTTCTGGATGCGCAACGAACTGGTGGCCGGCGGCGAAGCCCACGTTC
TGGTGGTCGGAAAAAAGGGAGCAGTAGTCGACTTCCGGTGCAGCTTGGAC
CTTCTGGGCGGACGCAGTGTGCAGGGAAAGTTTCGTTTTCAGAGGGACTC
CATTGAGAGCCTGGTGGATGACAAGTCTTCCAACTTCACCAGCTATCACT
TCTTCTGCCAGGTGAGCCGAGATTTCGGTCAGCCCGGCAGTGTCTCCTTC
ACGGACATAACAACCACCAGGAGTCCAGTGAGGCTGCGTCTGCGAAACCT
GAGACCAGCGAGCAAGAAGGACGACGACAAGGTGGTAGCTGTAGCGCACC
GACTACCAGCCACCGTTTGCGTTGATCTCGTTGGCTTCAACATGACCTCC
AAGTTCGCACGTAATGAAAATGCTTTGCTGCAGTTCTTCCTGTTCCACCA
GGCATTGAGAATAGAGAATTTCCTGGTCTACAACCACGACGAACTGCCAG
AGGAAGTGCATCACCTGTTGGAGCGCACCAACATTCATCTGTATGGCCTG
CCTTTTAACTTTCCCTTCCAGCAGTCCAATGGCACACGTTCGCGAATCCA
TCAACTATTACTCACGGACTGCTTGCTGCGGAATGTGAACCACGCCGGCT
TCACCCTTCTACTCCGCCCCAACGAGCTGTTCTTCCCCAACTCAAGTTCT
CTGGGGACCAGTGAAGGATCGCTCCAGCAGCAGCTGCGACACTTCTCCTC
CGAGATCACGCCGCTTCGAACTGGCACCATGTCCGTGGTGCTTCGATGAA
CCGGAAGAAAACTGTTTGCCCTGACTCACCGGTTCAGATCTACCGAACCG
GAGCGAAATCTGGAGTTTCAACCTTGCTGA
UFO01977.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:00:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11127-RA | 1484 | CG11127-RA | 87..1144 | 9..1066 | 5095 | 99.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:00:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 7463590..7464642 | 9..1060 | 4915 | 99.2 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:00:33 has no hits.
UFO01977.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:15:29 Download gff for
UFO01977.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11127-RA | 211..1287 | 1..1079 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:29:55 Download gff for
UFO01977.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11127-RA | 78..1154 | 1..1079 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:44:42 Download gff for
UFO01977.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11127-RA | 78..1154 | 1..1079 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:44:42 Download gff for
UFO01977.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 7463581..7464657 | 1..1079 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:29:55 Download gff for
UFO01977.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 3351086..3352162 | 1..1079 | 98 | | Plus |
