UFO01979.5prime Sequence
1043 bp (901 high quality bases) assembled on 2008-11-05
> UFO01979.5prime
CAGTCGACATGACAAAGATGGGCGGAAATTTGGCAGTGATGCTGCTGTCG
CTGTTTTTGAGTGCGTTAGCCACGGGCAACGGCAACTCCATACCGACGAC
CACGACGCCCCAGGGCGTATTCGAAACCCGTACGGACAAGCTGCCCGGTG
GCGCTGCCAGCGTGCCCAGTGGAGCGGGTATCTACGACGATATAGATACC
TTTGTGCCCTTCCGGAGCGACTCGCACGATCCGTTCTCATGGCATCTACT
GAAGACGGTGCTGCAGAACGAGACAGCCGACAAGAATGTGATCATCTCGC
CGTTCTCCGTCAAACTGGTGCTGGCCCTGCTGGCTGAGGCGGCCGGAGCC
GGAACCCAGACGCAAGTGGAGCTGGCCAACACGCAAACAGACATTCGATC
GCAAAATAATGTGCGGGAGTTCTACCGCAAGACACTTAATTCCTTCAAGA
AGGAGAACCAGCTCCACGAGACGCTCAGTGTGCGCACCAAGCTCTTCACG
GACAGCTTCATCGAGACACAGCAGAAGTTCACGGCCACGCTGAAACACTT
CTACGACAGCGAGGTGGAGGCGCTAGACTTCACCAATCCCGAGGCGGCGG
CAGATGCCATCAACGCCTGGGCCGCCAACATCACGCAGGGCAGACTTCAG
CAGCTAGTAGCCCCGGACAACGTGCGCAGCAGCGTAATGTTGCTGACCAA
TCTGATCTACTTCAACGGTCTGTGGCGGCGGCAGTTTGCCACCACATTCC
AGGGATCTTCTCCGCAGCAGGACGACAGTCGCGGCGAGTCATGAGAGACG
ACTACTCTACTACCCACTCGAGAGCTGAGCGAATCTGGCTGCCTACAGGC
AGACTCCTGTCTCTGTGCTACGCTGATGCTCTGATGTCAGACTGAACACA
GTAAGCGCATGCTGAGAGGATGAGACTGCATCTCATCCACTAGATGACGG
GCACTAACTCTCGACGCTGCGAAGACAGTGAAAGCCTGATGCAAGTTAGG
TGACAGTTGAATCAGTACATAACTAACGTGTGATCAGTACGTA
UFO01979.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:38:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Spn27A-RB | 2283 | CG11331-RB | 173..988 | 9..813 | 3805 | 98.7 | Plus |
| Spn27A-RA | 1569 | CG11331-RA | 173..988 | 9..813 | 3805 | 98.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:38:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 6672427..6673175 | 757..9 | 3745 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:38:03 has no hits.
UFO01979.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:15:28 Download gff for
UFO01979.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Spn27A-RA | 165..961 | 1..793 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:06:14 Download gff for
UFO01979.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Spn27A-RA | 168..964 | 1..793 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:20:40 Download gff for
UFO01979.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Spn27A-RA | 168..964 | 1..793 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:20:40 Download gff for
UFO01979.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 6672384..6673180 | 1..793 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:06:14 Download gff for
UFO01979.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 6672384..6673180 | 1..793 | 98 | | Minus |
