UFO01987.5prime Sequence
941 bp (841 high quality bases) assembled on 2008-11-05
> UFO01987.5prime
CAGTCGACATGCGTGATGAGATTTTGGACCCCAGTAACCTAGTGAAGAAC
CGGGAGATACTCTACCGACTGATGATCAGCCAGCTGATGTACGACGGCCT
GGAGAAGTTCGCCATGGAGCTGTCCATGCTGGTGAAGGCGGACCAGTGCG
CTCCCAGTGAACGCCTGCTGCACGTAATGATTGCAGGGATGCAGACGCTG
AGCGACAAGGACAAAACCAACTCGGATGATGTGCTGCCCGGCATAGACTT
GGAATTCGAGCCGGAGGCTTCGGCCTTGGCCCCGGAACCACATTCCTACG
AAACCGCGTATGTGACCTCGCACAAGCAGGCCTGTCGCGCCGGCGCCTTC
AGTTGCGATGGTTCCCTGGTGGCCACCGGGAGCGTGGATGCCAGCATCAA
GATTCTGGACGTGGAGCGGATGCTGGCGAAGTCTGCGCCCGAAGATATCG
AGCCGGGCAGGGAACAACAAGGCCATCCAGTGATTCGCACGCTCTATGAT
CACACTGATGAAGTGTCTTACCTGGAGTTCCATCCCAAGGAGCACATCCT
GGCCTCCGCCTCGCGCGATGGCACTGTTAAGTTGTTTGACATTGCCAAGC
CTTCGGTAAAGAACGCCCACAAAGTGTTCACCGACTGCGAGCCGGTGCTG
TGCCTGTCTTTTCATCCTACTGGTGACTACGTAGCCATCGGAACGGAACA
TAACGTCTTGCGGGTCTACGATGTGGCCACCACCCAATGCTTCGTGAGTG
CCATTCCCTCGCAGCAGCACAAGCTGGAGTTACTTGCGTGAAATATTCGC
CCACGGGGAACTCTACGCACAGCAGCTATGATGTGACTCAAATATGGGAT
GGATCAGCGGGGCGGTGCATCACTCATTGCGAGGCCATGGCGAGCGGCAT
ATGCTTCCTTGAATTTACCGGATTGACAGTACTCCTATCTT
UFO01987.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:00:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CstF-50-RA | 1407 | CG2261-RA | 83..1032 | 8..941 | 4170 | 97.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:00:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 31736078..31736881 | 810..8 | 3940 | 99.6 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:00:26 has no hits.
UFO01987.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:09:52 Download gff for
UFO01987.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CstF-50-RB | 55..957 | 1..892 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:29:50 Download gff for
UFO01987.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CstF-50-RA | 76..978 | 1..892 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:44:39 Download gff for
UFO01987.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CstF-50-RA | 76..978 | 1..892 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:44:39 Download gff for
UFO01987.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 31735986..31736884 | 1..892 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:29:50 Download gff for
UFO01987.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 27561708..27562606 | 1..892 | 97 | | Minus |
