UFO01994.5prime Sequence
797 bp (725 high quality bases) assembled on 2008-11-05
> UFO01994.5prime
CAGTCGACATGATACCGACCATAACGAAGAAGTACCAGAACGTGGTGATT
AGCACGGGCAACATCATCGCCACGGAACTGGGACAGCGCAAATCGAACGA
GGAGCTGTACGACGGCCTGAAGATAACGCTCCACACCGACTCGACTGCGG
AGCGCGTGGTGGTTGAAAAGGAGATCGACGAGCTGCATGGGCGGGTGCAA
AGGGCCACCCAGGAGTTGACCACCCGCTTGACGGAGAATGGACGGAATGA
GATAAGTATCGGTGCCAAGATATTCCTCAATCGCCACTCCACAGAGTCTG
TGAATCAGGCGGTGGAGGAGCTGCTCCACATACTTAGTGTGACGCACGTG
GACAATGTGGTGTTGGCCTACCACCCGAATGCGGTTGCCACCGCAACGCC
GGTGGCCACAACCAAACCGCCCTGTTCCGAGGATTCCAACGTCAGCAGGG
CTACAAACTGGAGCCAGCGCAATGGAAAGGAAGGAGTGGCAGAGCTGAAG
GAACTGTACAAAACACTGGAGCAATATGCCCTCAAGCAGCAGATTACACA
GCTGGGAATTGCCGATCTGGATGCGGCGGCGCTGGAAGAGCTACACAACA
GCGCACAGGTTGTGCCCACAATTGCCCAGGTCAACCTGTCTACGTGCTGC
GTGGTGCCACCAGAACTGCAGGAGTTCTGCACCGCTCACGACATCCAACT
GAACACGCACAGCGACACGGTATAGGTGCATAGCGCCGCCTTGAAGTATG
CAGCCTCCCATCACGAATGAGAGTGACTGATGGATGTTCGGGACTAT
UFO01994.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:42:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Gclm-RB | 1505 | CG4919-RB | 160..867 | 8..715 | 3525 | 99.9 | Plus |
| Gclm-RA | 1211 | CG4919-RA | 160..867 | 8..715 | 3525 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:42:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 22685644..22686351 | 715..8 | 3525 | 99.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:42:36 has no hits.
UFO01994.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:09:56 Download gff for
UFO01994.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Gclm-RA | 169..889 | 1..719 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:36:24 Download gff for
UFO01994.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Gclm-RA | 152..872 | 1..719 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:26:30 Download gff for
UFO01994.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Gclm-RA | 152..872 | 1..719 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:26:30 Download gff for
UFO01994.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 22685644..22686354 | 1..715 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:36:24 Download gff for
UFO01994.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 18511366..18512076 | 1..715 | 99 | | Minus |
